| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3063 |
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| Symbol | |
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| ID | 6207435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3918908 |
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| End bp | 3921733 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692727 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001819943 |
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| Protein GI | 182414877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.813349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00138683 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCATG CCCTCTGCGT TGCTCCGGTT GCTCTGTCCC CCGCTCTTCT CCGTACGGTT
TTACGCGCGT TCATCGTCAG CCTCGCGGCC ATCGTCGTGT CTTCCTCCAC GCCCTCCTCT
CTCTCCGCCG CCGCGGCTGC GACGCCGCGC CACACCACCG CCGCGCTGAC TACCGAGTAT
CAGACGGATC CGGTCGGCAT TGACGTCGCG CGTCCGCGGC TGAGCTGGCA ATTGCGGTCC
GACGCGCGCG GACTCACTCA AGCCGCCTAC CAGATCCAAG TCGCGCTCGG CATGGACGCG
CTTGCCCGCG GCGATCTGTT CTGGGATTCC GGCAAGATCG CGTCCGATCA ATCCGTTCAA
GTGGACTACG CCGGCCCGGT CCTCTCCTCG AGCCAGCGCT ACATCTGGCG GGTGCGCACG
TGGAATCGGA GCGGCGAAGC CTCCGACTGG AGCGCCCCGG CGTTTTGGGA AATGGGCCTG
CTGCGGCCGT CCGACTGGTC CGCTGCGTGG ATCACGCCGG CGTGGGACGA AGACACGAGC
AAATCGAACC CCGCTCCGCT GCTGCGCAAG GAATTCGCCG TCGAGGGCGA GATTCGCGAC
GCACGACTCT ATGTTACGAG CCTCGGGCTC TACGAGGCCG AGCTCAACGG CCAGCGCGTC
GGCGACGCGG TGCTCACACC GGGTTGGACG AGCTACGATC ACCGGCTCGT CTATCAAACC
TACGACGTCA CCTCGCAGTT GAAATCCGGC GCCAACGCGC TTGGCGTCAC GCTCGGCAAC
GGCTGGTATC GTGGGCCGCT CACATGGGAC CTCGAGCGCA ACACCTACGG CGACCGCGTC
GCGTTGCTCG CGCAGCTGCG GATCACCTAC GCCGACGGTC GCATCCAAAC CATCGCCAGC
GACGCGTCCT GGAAAGCCTC CACCGGGCCG ATCCTCCTCT CTGAGATCTA TGCCGGCGAA
TGCTACGACG CGCGGCTGAA AAAATCCGGC TGGAGTCAGC CCGGCTATGA TGACCGCGAT
TGGTCGGCCG TGCGCGTGCT CGATCACCGC AAGGACATCC TCGTCGCACC GCTGAGCCCG
CCGATGCGCC GGATCGAGGA GATCAAGCCC GTGGCGATCC TGCACACGCC CGCCGGCGAA
ACGGTGATCG ATTTTGGCCA GAACATGGTC GGCTGGGTTC GCCTGAAAGT TCACGGTCCG
GCTGGCACGA CCGTGACGCT CCGGCACGCC GAGGTGCTCG ACAAGGCCGG CAACTTTTAC
ACCGCGAACC TGCGCCACGC TGCACAGCAG ATCGACTACA CGCTCAGCGG TCGCGGCGAC
GAAACCTTCG AGCCGCATTT CACCTTCCAG GGCTTTCGCT ACGTCGCGGT GCAGGGTTGG
CCCGGCGAGC CGTCGCTCGA ATCGTTCACC GGGATCGTCG TGCATTCGGA CCTGCCGCGC
ACCGGACATT GGGAGAGCTC GAACGCGCGG CTAAACCAGC TTCAGCACAA CATTCTCTGG
GGGCAGAAGG GAAACTTCGT CGACGTGCCC ACCGACTGCC CGCAACGCGA CGAAAGGCTC
GGCTGGACCG GCGACGCACA GGTGTTTGCG CGCACGGCGG CGTTCAACCT GAACGTCGTG
GGCTTTTTCA CCAAATGGCT GCGCGATGTC GCGGCGGACC AGAAGCCGAG TGGCGCCGTG
CCGTTCGTGA TTCCCGACGT GCTCTCGCGG AACAAAGAGA CCGAAGGCTC CTCCGGCTGG
AGCGATGTCG CGACGATCGC GCCGTGGACA TTGTATCTCG TTTACGGTGA CCGCCGCGCG
CTCGAGACGC AGTATCCGAG CATGAAGGCG TGGGTGGAAT TTATTCGCAC CCGCGCGAAG
GGCGACCTCT GGACCACCGG CTGGCACTTC GGCGACTGGC TCAGCTACGC CACCACCTCG
CCCGATTACC CCGGCGCAAC GACCGGCAAA GATCTGATCG CGTCAGCGTT TTACGCGCAC
TCGGCCGATC TGCTCTCGAA GGCGGCCACA GTGCTGGGCA AAGCCGACGA CGCGCGCACC
TACACCGAGC TTTTCGAGCG GATCAAGGTC GCGTTCAACC GCGAGTTCGT CACGCCGTCG
GGCCGCGTGG GCGAAGCCAC CCAGACCGCT TACGTGCTCG CGCTGCAGTT TGACCTCTTA
CCCGAAGACA AGCGCCCCGA GGCGGCGCGC CGGCTCGCGG CCGACGTCAA ACGTTTCGGC
AATCACCTCA CCACCGGATT CCTTGGCACG CCGTATCTTT GCCGCGTATT GAGCGATCAC
GGCCAACTCG ACACCGCTTA CGCGCTCCTG AACCAGGACA CTTATCCGTC CTGGCTCTAT
CCCGTGAGCC AGGGCGCCAC GACCATCTGG GAACGCTGGG ACGGCATCAA GCCGGACGGC
ACGTTCCAGG ACGCGGGCAT GAACTCCTTC AACCACTATG CCTACGGTGC CATTGGCGAC
TGGATGTATA GCGTCGTCGC CGGCATCGAC ATCGATCCCG CGGCGCCCGG ATATAAACAC
CTGCTGATTC AGCCGCGTCC CGGCGGCGGG CTCACCGACG TGCGCGCGCG GCTTGAGACC
CAATACGGCC AAGTCGCGTC CGCCTGGAAG CTCGCCGATG GGCACCTCGA ACTCGTGGTC
GAAATTCCGC CGAACACCCG CGCGACGATC CGACTGCCCG GCGCCGCCAG GATGAAGGAT
GTGCGCGAAT CCGGCCAGCC GCTCGCCCGC GCCGCCGGCA TTACGCAGGT TTCCCGTCGG
GACGATGCGG TGATCGTCGC CGCCGGTTCC GGCGAATACC GGTTCACCTA CCCGCTTCGT
CGTTAG
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| Protein sequence | MSHALCVAPV ALSPALLRTV LRAFIVSLAA IVVSSSTPSS LSAAAAATPR HTTAALTTEY
QTDPVGIDVA RPRLSWQLRS DARGLTQAAY QIQVALGMDA LARGDLFWDS GKIASDQSVQ
VDYAGPVLSS SQRYIWRVRT WNRSGEASDW SAPAFWEMGL LRPSDWSAAW ITPAWDEDTS
KSNPAPLLRK EFAVEGEIRD ARLYVTSLGL YEAELNGQRV GDAVLTPGWT SYDHRLVYQT
YDVTSQLKSG ANALGVTLGN GWYRGPLTWD LERNTYGDRV ALLAQLRITY ADGRIQTIAS
DASWKASTGP ILLSEIYAGE CYDARLKKSG WSQPGYDDRD WSAVRVLDHR KDILVAPLSP
PMRRIEEIKP VAILHTPAGE TVIDFGQNMV GWVRLKVHGP AGTTVTLRHA EVLDKAGNFY
TANLRHAAQQ IDYTLSGRGD ETFEPHFTFQ GFRYVAVQGW PGEPSLESFT GIVVHSDLPR
TGHWESSNAR LNQLQHNILW GQKGNFVDVP TDCPQRDERL GWTGDAQVFA RTAAFNLNVV
GFFTKWLRDV AADQKPSGAV PFVIPDVLSR NKETEGSSGW SDVATIAPWT LYLVYGDRRA
LETQYPSMKA WVEFIRTRAK GDLWTTGWHF GDWLSYATTS PDYPGATTGK DLIASAFYAH
SADLLSKAAT VLGKADDART YTELFERIKV AFNREFVTPS GRVGEATQTA YVLALQFDLL
PEDKRPEAAR RLAADVKRFG NHLTTGFLGT PYLCRVLSDH GQLDTAYALL NQDTYPSWLY
PVSQGATTIW ERWDGIKPDG TFQDAGMNSF NHYAYGAIGD WMYSVVAGID IDPAAPGYKH
LLIQPRPGGG LTDVRARLET QYGQVASAWK LADGHLELVV EIPPNTRATI RLPGAARMKD
VRESGQPLAR AAGITQVSRR DDAVIVAAGS GEYRFTYPLR R
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