Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3026 |
Symbol | |
ID | 6204360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3883578 |
End bp | 3884888 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641692690 |
Product | chloride channel protein |
Protein accession | YP_001819906 |
Protein GI | 182414840 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.139269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TCAGCGACGA CTCTGCCTTG GGTGCGACCG AGGTGCGGCG CCGTCACATC GTGTTGAAGG CGATCCTGGT CGGCGTGCTG GCGGGCGCGC TCGGCGCGGC GTTTCGACTG GCGTTGCAGA TCGCCGAGAG CGCGCGGGCG CAGGCGATCG CGGCCGCCGC GGGGCCGTGG GCACTCGTGG CGGGGATCGC GATCGGAGTC GTGGGCGGCG CGCTGGGAGT ATGGCTCGTC TGGCGGTTCG CGCCGCATGC GGCGGGCAGC GGCATTCCGC ACCTGAAGGG CGTGCTGGAG CGGCAGGCCG AACCGGAGTG GAAACGACTG CTGCCGGTGA AGTTCATCGG TGGCGTGCTG GGCATCGGCG GCGGACTCGC GCTGGGGCGC GAAGGGCCGA CCATCCAGAT GGGCGGAGCG ACCGGAGCGA TGGTCGCCTC GTGGCTGCGC GTGAGAGCGG GTGAGGGCGA ACGCCGCGCA TTGATGAGCG CCGGTGCAGG CGCCGGTCTG GCCGCGGCGT TCAACGCTCC GTTGTCGGGA CTCGTGTTCG TCATGGAGGA ACTGCACGGC AACTTCACGC CGGTGCTTTT TGTGGCGGCG TTTCTCGCGT CGGTGTCGGG GGACGTCGTG GGCCGGCTGA TGATCAACGA ACTGCCGGTG TTTCATTTGA GCGGCATCGC CGCGCCGGGC TTGAGCTCGT TGCCCTGGGC GGCGCTGCTC GGCGGCGCGC TGGGATTGTT CGGGGTGGCA TTCAATCGCG TGTTGCTCGG GAGCATGAAC CTGCACGACC GGCTGCGGCA CTGGCCGGGC TGGGTGCTCG GTGCGATCGC CGGCGGAACG ATTGGCCTCG CCGCGTGGTT TTTGCCGGGC CTGGCCGGTT CGGGGGGACA CCTGGTGCAG GCCGCGCTGG CGGGGGAGCT GGCGTTGTAT CTCGTGCCGG TGTTCGTGCT CGCGCGGTTT GGTGCGACGA TGTTGAGCTA CGCGTCGGGA GCGGCCGGCG GAATTTTCGC GCCCCTGCTG GTGCTCGGCG CACTCGCGGG ACTGTGGTTT GGCAGCGGAG TCCACGCGCT CGTTTCAAAT CCCGGACTGA CGCCGGCGGT TTTTTGTGTG CTGGGGATGG GTGCGATGTT CACGGCGGTC GTGCGCGCAC CGCTGACCGG CATCGTGCTG ATGGTGGAAC TCACCGGGAC CTATGGATTC ATGCTGCCGC TGCTCGTGAG CTGCATGGCG GCGTATGGGG TCGCGGAGCT GCTCGGCAAC ATGCCGATCT ACGAGGCACT GCGCGAACGC TCGCTACGTC CCTCGCGCTG A
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Protein sequence | MEKISDDSAL GATEVRRRHI VLKAILVGVL AGALGAAFRL ALQIAESARA QAIAAAAGPW ALVAGIAIGV VGGALGVWLV WRFAPHAAGS GIPHLKGVLE RQAEPEWKRL LPVKFIGGVL GIGGGLALGR EGPTIQMGGA TGAMVASWLR VRAGEGERRA LMSAGAGAGL AAAFNAPLSG LVFVMEELHG NFTPVLFVAA FLASVSGDVV GRLMINELPV FHLSGIAAPG LSSLPWAALL GGALGLFGVA FNRVLLGSMN LHDRLRHWPG WVLGAIAGGT IGLAAWFLPG LAGSGGHLVQ AALAGELALY LVPVFVLARF GATMLSYASG AAGGIFAPLL VLGALAGLWF GSGVHALVSN PGLTPAVFCV LGMGAMFTAV VRAPLTGIVL MVELTGTYGF MLPLLVSCMA AYGVAELLGN MPIYEALRER SLRPSR
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