| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2994 |
|---|
| Symbol | |
|---|
| ID | 6204291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3845305 |
|---|
| End bp | 3846522 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641692659 |
|---|
| Product | peptidase C1A papain |
|---|
| Protein accession | YP_001819875 |
|---|
| Protein GI | 182414809 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4870] Cysteine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.766742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.41345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCCG TGCCGAGTGA TCCAACAGAT GGAGCCCGCC GTCCCCGACG GGCTGCGCAC
CCGCGGCTTG GCCGCGGCGC CTGCCTCGCC CTCGCACTCG CCTTGGCCGC CACGCCCCCG
GCTTTGGGCG CGCCCTCCTC CATTCCGGCA GGCACGCACT TCGACACGTT CACCGTCGGC
GCGGCGACCT ATCGCGACGT TAAGGTCCGC TCCGTGAACG CCCGCACCGT AATGATCACG
CATTCGCGCG GGATGACGTC GATCAAGCTG CGTGATCTTT CGCCGGAGTG GCAGCAGAAG
TTCGGCTACG ATCCCGCCAC GGAGGCCGCC GCCGAGCAGG CCATCGCCAC GCCGCCCAGC
CCGCCGCCAT CAAAACCGAC CGCGCGGCCG GCCGCGGGCG CGACGGGTGC GGTGACCGCC
AAGCTCGAGC GGCTGCTGCG GCAATTCGGC GAACCCGCGA CGATCAACGC GGAAGTCGAT
CTCCGCCCGA AGTATTTTCA GATGGAACTG GCGGTGAGGA GCCAGGGCCG CCGGCCGAGT
TGCGCCGTGT TCGCCATCGT CAGCGCGCTC GAATTCCAAG CCGCCGAGCT GACGGGTGAA
CCGAGTAAAC TTTCCGAGGA GTATCTCAGC TGGGCCACGC GCAAGACCGT CCAGCGGGTC
GTCACGCCGA TCGCGGCCAA CGCCGAGGGC GCGGAGAATT CCACCGACGC CGCCGGCAAT
GCCGACGAGG GGTTTTCGTT GAACGAGGTG GTGCTCGCGC TGCGCACCTA CGGCGTGCCG
CTGCAATCGT CGATGCCGAA CCGGTTCGGC CGCGCCATCT CCGAGATCGA AGACCCGGCG
CCCGCTATCG TGGATGAGGC GCGCACGCAT CAGCGCGTGT TCGTGCTGCC GATTCCCGGC
CGCAACACCG GCACGGCCGT CAACAATATC GTCCATGCGC TCAACGCCGG GATCCCGATT
CCGATCGGCG TGGAGTGGCC GCACTACCGC TCGATCCGCA CCGGCAGCCT GATCGACCAG
AAACCACTCG AGGACGGCGG GCATGCGGTG ACGCTCGTCG GTTATCGCTG CACGACCAAT
CGGCTCGAAG ATGTCGTCTT CATTTTCAAG AATTCGTGGG GTCCCGACTG GGGCCAGGGC
GGCTACGGGA CGGTGACCTA CGGTTATCTG AAGAAGCACC TGCACAGTGC GGTCCTGCTG
GAGGTGCAGC GCGGGTGA
|
|---|
| Protein sequence | MEPVPSDPTD GARRPRRAAH PRLGRGACLA LALALAATPP ALGAPSSIPA GTHFDTFTVG
AATYRDVKVR SVNARTVMIT HSRGMTSIKL RDLSPEWQQK FGYDPATEAA AEQAIATPPS
PPPSKPTARP AAGATGAVTA KLERLLRQFG EPATINAEVD LRPKYFQMEL AVRSQGRRPS
CAVFAIVSAL EFQAAELTGE PSKLSEEYLS WATRKTVQRV VTPIAANAEG AENSTDAAGN
ADEGFSLNEV VLALRTYGVP LQSSMPNRFG RAISEIEDPA PAIVDEARTH QRVFVLPIPG
RNTGTAVNNI VHALNAGIPI PIGVEWPHYR SIRTGSLIDQ KPLEDGGHAV TLVGYRCTTN
RLEDVVFIFK NSWGPDWGQG GYGTVTYGYL KKHLHSAVLL EVQRG
|
|---|
| |