| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2993 |
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| Symbol | |
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| ID | 6208810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3843653 |
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| End bp | 3845080 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641692658 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001819874 |
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| Protein GI | 182414808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.624539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTG ACTCGCACTT ACCGCTCAGA GAAAAGCTTT CTTACGGTTT CGGCGACCTC
GCCTCCGTCC TCTACTGGCA GACCTTCATG GTCTACCTGA CGTTCTTCTA CACGGACGTC
TTCGGCATCG CCGCCGCGGC GGCGGGCACG ATGCTCGCGC TGAGTCGGAG CGTCGACGCG
TTCTTCGATC CGGTCATGGG GATGATCGCC GACCGCACGC AGACGCGCTG GGGCAAGTTC
CGGCCTTACC TGCTCTGGCT CTGCGTGCCG TTCGCCATCA TGGGCGTGCT CACGTTCACG
GTGCCCGAGT TCGGACCGAC GGGTAAACTC GCCTGGGCGT GGATCACCTA CAACGGGCTG
ATGCTGCTCT ACACCGCGAT CAACATTCCC TACACCGCGA TGCTCGGCGT GCTCACGCCC
AACCCCAACG AGCGCACCAC GCTTTCCTCC ATCAAATTCG TCTTCGCCTT CGCCGCCGGC
ATGATCGTGT CCGCCACGGT GCTGCCACTG GCCAAGGTCT TCGGTCACGG CAACGACGCC
CGCGGCTGGC AGATGACGTT CGTGGTGATC GGCGTCGCGG CGATTGTTTT CTTTCTGATC
ACGTTCTTCA ACACGAAGGA GCGCGTCCAG CCACCGAAGG CGCAGAAGAC GTCCGTCGGC
CGCGACCTGC TCGATCTGAT CACCAACGTT CCTTGGCTGA TCCTGCTCGC GACCACGATC
ACCTTCATCC TCTACGTCGC GCTGCGCAGC AGCGTGACGG TGCACTATTT CAAGTATTTC
GTCGGCACCC AGACCGTGAC GCTGCCCGCG TGGCTGCCGA AGATCGGCGG CACGCAGGAA
TGGCATCTCG AAAGCCTCGT CTCGATTTTC AACACCAGCG GCCAGCTCGC CTCGCTCCTC
GGCGTCATGG CGATTCCGTT CTTCGCTCGG CTGGCCGGCC GCAAGCGGAC GTTCATCGGG
ATGTTCATCA TCGCGATCCT CAGCACCGCG TCCTACTACC TGCTCCAACC CAGCCAGGTG
TTCCTCATCA TTGGAATCAA CCTGATCGGC TCGTTCACCG GCGGCCCGCT CAGCGCGCTG
CTCTGGGCCA TGTATGCCGA CACCGCCGAC TACGCCGAAT GGAAGCGCGG TCGCCGGGCG
ACCGGTCTCG TGTTCTCCGC CTCGATCTTT TCCCAAAAAC AAGGCTGGGC GATCGGCGCC
GGCGTCGCGC TCTGGCTCAT GGCCAGCGTC GGTTTCCAAG CCAATGTCGA CCAGACGCCG
GAATCGCTGC ACGGTTTGGT GAAGCTGATG AGCATCTTCC CGGCGGCGTT CGGCATCCTC
GCGATCGTGC TCATCCTCTT CTATCCGCTG AACGAGAAAA AAATGCAGCA GATCGAAACG
GAGTTGAAGG CCCGCCGCGA CGCGATCGGC GAATCGACGC CGGCGTAA
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| Protein sequence | MTADSHLPLR EKLSYGFGDL ASVLYWQTFM VYLTFFYTDV FGIAAAAAGT MLALSRSVDA
FFDPVMGMIA DRTQTRWGKF RPYLLWLCVP FAIMGVLTFT VPEFGPTGKL AWAWITYNGL
MLLYTAINIP YTAMLGVLTP NPNERTTLSS IKFVFAFAAG MIVSATVLPL AKVFGHGNDA
RGWQMTFVVI GVAAIVFFLI TFFNTKERVQ PPKAQKTSVG RDLLDLITNV PWLILLATTI
TFILYVALRS SVTVHYFKYF VGTQTVTLPA WLPKIGGTQE WHLESLVSIF NTSGQLASLL
GVMAIPFFAR LAGRKRTFIG MFIIAILSTA SYYLLQPSQV FLIIGINLIG SFTGGPLSAL
LWAMYADTAD YAEWKRGRRA TGLVFSASIF SQKQGWAIGA GVALWLMASV GFQANVDQTP
ESLHGLVKLM SIFPAAFGIL AIVLILFYPL NEKKMQQIET ELKARRDAIG ESTPA
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