Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2988 |
Symbol | |
ID | 6204433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3835609 |
End bp | 3836595 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641692653 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001819869 |
Protein GI | 182414803 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0133874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATCG GCCGTTTTCG TTTCGCCCTG CTTTCGCTGC TCCTGGCTGT CCCTCTCGCC GCTCAGGAGG CCGGAGATAA CCTCAACCTC CGATTTGCCA ACGGCATTGC CGCCATCGTC GAGGACAAGG TCATCACGGT CGACGACGTT CGCCGCGAGA TCGCGCCGCT GATCGCGCAG TTGCAGCGCG AGGCGCGCAA CGAGCGCGAG TTCAACGAAA AGCTCGAGCA ACTCCAGGAC GACGTCATCC AGAGCCTCAT CGACCGCGTC CTGATCGTGA AGGAATTCCG CAAGGACGAG AAGAAGCACA TTCCCGACAG CTTCATCGAC AACCGGCTGG CCGACATTCT GAGCGAGCAG TTCGACAACG ACCGCTCAAA ATTCCTCGCC TATCTCCACT CGCGCGGCAC CACGCTCCGC GAGTATCGCC GCGAGGTCGA GGAGGACATC ATCTACCAGT ACATGCGGCA GGAGCAGCGG AAGTCGCAGA GCATCGTCAG CCCCGTCCGT ATCGAGACGT TCTACAACGA GAACAAGGAC CGGTTTTATC AGGAGGATGG CGTCCACCTG CGGCTGATCC AGTTCTCGCG CGCCAACGGC GAAACCGACG AAGACCTGCG CGCCAAGGCC AACCTGGTGA TGGCCCGGAT CAAGGCGGGC GAAAAATTCG AGGATCTGGC CCGCGAATAC AGCCAGGACT CCCGTCGCGC CAAGGGCGGC GACTGGGGCT GGCAGAAGCG CTCCGATCTC AAGCCGGAGT TCAGCGAACC GCTCTTCTCG CTCAAAAAGG GCGAGGTCAG CGATCCCATC ATTCTCCCCG AGGGCTGTTT CATCCTCTTC GCGGAGGACC GCAAATACGC CGGCATTCAG CCGATCGACG AGGTCCGCGA CGAAATCGAG CGCGTGCTCG TCCAGCAGAT GTCGCGCAAC AGCCAGGAAC ACTGGCTGGA GCGACTCCGC CGCAACGGCT ACGTGAAGCA CTACTGA
|
Protein sequence | MMIGRFRFAL LSLLLAVPLA AQEAGDNLNL RFANGIAAIV EDKVITVDDV RREIAPLIAQ LQREARNERE FNEKLEQLQD DVIQSLIDRV LIVKEFRKDE KKHIPDSFID NRLADILSEQ FDNDRSKFLA YLHSRGTTLR EYRREVEEDI IYQYMRQEQR KSQSIVSPVR IETFYNENKD RFYQEDGVHL RLIQFSRANG ETDEDLRAKA NLVMARIKAG EKFEDLAREY SQDSRRAKGG DWGWQKRSDL KPEFSEPLFS LKKGEVSDPI ILPEGCFILF AEDRKYAGIQ PIDEVRDEIE RVLVQQMSRN SQEHWLERLR RNGYVKHY
|
| |