Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2987 |
Symbol | |
ID | 6204252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3834962 |
End bp | 3835474 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641692652 |
Product | hypothetical protein |
Protein accession | YP_001819868 |
Protein GI | 182414802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00846336 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC TCGAATGGCT CGAGGCCTTG AGTTACGTGG TCACCATCGT CGGTCTCCCG CTCGCCATCG TCGTTTTCAT CGCGGAACAA CGCAAAGAGC GACAAAACGA CGACGAGGAG GTCTACCTGC GGCTGTCCGA CGACTATTCG AAATTTCTCC GGCTGGTGCT GGACAACGCG GATCTTCGGT TGATGACGCA GCCGATTCCG GAAGCACCCT TCACCGCCGA GCAGATCGAA CGCCGCAACC TCCTCTTCGA GGTGCTGATC TCGATCTTCG AACGCGCCTA CATTCTCGTC TACGAGGAAA AGATGTCGCG CCAGGCGGCG CGCCTGTGGC AGACGTGGGT CGACTACATG CGCGACTGGT GCCACCGCCG GGACTTCCGC GAACAGCTGC CGGCCCTGCT GCAGGGTGAA GATCCCGATT TCCAGGACTA CATTCTCGCG ATCGCCGCCG AGGAGTCCGC GAAGCCTGCG GGCGCCCTCG CGCGAGCCGT TACCGCGGCG TAG
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Protein sequence | MTPLEWLEAL SYVVTIVGLP LAIVVFIAEQ RKERQNDDEE VYLRLSDDYS KFLRLVLDNA DLRLMTQPIP EAPFTAEQIE RRNLLFEVLI SIFERAYILV YEEKMSRQAA RLWQTWVDYM RDWCHRRDFR EQLPALLQGE DPDFQDYILA IAAEESAKPA GALARAVTAA
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