| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2977 |
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| Symbol | |
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| ID | 6207532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3824262 |
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| End bp | 3825440 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692642 |
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| Product | phosphonopyruvate decarboxylase |
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| Protein accession | YP_001819858 |
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| Protein GI | 182414792 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG CCCAGCTTTT CCTTGACGCC TGTCGCGAGC GCGACGTCCG GTTCTTCACC
GGCACACCGT GCTCCTACAT GAAGCCGTTC ATGAACGCGG TCATCAACGA CCCGGCGCTG
ACTTTCCGCG ACGCAACCAA CGAAGGCGAT GCCGTGGCGC TCGCCGCCGG CGTGCACGTG
GCCACCGGAG CGACCACGGT GGTGATGTTC CAAAACTCCG GACTCGGCAA CGCCGTCAAC
GCGCTCACCT CGCTCAACGT TCCCTTCCAG ATTCCTGCGT TGCTCATCAT CACGCATCGC
GCGCAGCCCG GCGGCGTCCC CGACGAGCCG CAGCACCAGT TCATGGGCGA GGTCACGATT
CCGCTGCTCG AGGCGTTGCA GATTCCCTGG GCACCGTTTC CCAAAACGGC CGCCGAAATC
GCACCGCTGC TCGATCGCGC ACTCACCCAT CTGCGCGAAC GCTCGCTGCC GTTTGCCATC
GTCATGCCCT GGGGCGCCGT CGAACGCACT CCCCTGCGCA TCAACCGCCC GAGCGATCCC
ATCGGCGCCC GCACGTTGTC CTTTCGGGAA ACTCTCAGCC GACGCTACGA AACGCGCGCG
ACGCGCGCCG AAACGCTGCA GGCGCTGCTC GCCGCCAAGC AGCCGGACGA CGTGGTGATC
ACCACCACCG GCTACACCAC GCGCGAGCTC AGCTCGATCG CCGACGCCGA CAACCACCTC
TACGTTGTCG GCTCGATGGG CAGCGCCAGC GCGTTCGCGC TCGGTCTGGC GCTCTACCAT
CCGTCGCGCC GGATCTGGAT GCTCGACGGC GATGGCGCCG CGCTGATGCG ACTGGGCAAT
TTCGCGTCGA TCGGCGCATT CGCGCCGCGA AACTTTTTTC ATCTCCTCAT CGACAATGAA
GCGCACGACT CCACCGGCGG CCAGGCCACG GTGAGCCGCG GCGTTTCGTT CGGTGCCATC
GCCCAAGCGT GCGGCTACGC GCAGGCATTC GGCACCGATT CGCTCGAGGA ACTGCGCCAA
CTGCTCGCAG CGCATGACGT GAACCGCGGT CCGACGCTCG TACATTTCCG CACGAAGATC
GGCACCCTGC CCAACCTCGG CGTGCCGCAG GTCAAGCCGC CCGCCGTGAA GCAGCGCCTC
ATGCGCCACC TCGGCGTCGC GACGCTTCGG ACTCGGTAA
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| Protein sequence | MIAAQLFLDA CRERDVRFFT GTPCSYMKPF MNAVINDPAL TFRDATNEGD AVALAAGVHV
ATGATTVVMF QNSGLGNAVN ALTSLNVPFQ IPALLIITHR AQPGGVPDEP QHQFMGEVTI
PLLEALQIPW APFPKTAAEI APLLDRALTH LRERSLPFAI VMPWGAVERT PLRINRPSDP
IGARTLSFRE TLSRRYETRA TRAETLQALL AAKQPDDVVI TTTGYTTREL SSIADADNHL
YVVGSMGSAS AFALGLALYH PSRRIWMLDG DGAALMRLGN FASIGAFAPR NFFHLLIDNE
AHDSTGGQAT VSRGVSFGAI AQACGYAQAF GTDSLEELRQ LLAAHDVNRG PTLVHFRTKI
GTLPNLGVPQ VKPPAVKQRL MRHLGVATLR TR
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