| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2947 |
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| Symbol | |
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| ID | 6205528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3779112 |
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| End bp | 3780647 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692612 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001819828 |
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| Protein GI | 182414762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.637874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCTCC AATCGCGCGA TTCGTTTTTC TCGAGGCGCC TGCTGACCGC ATGCTGGTGT
TCGCTCTTGT TCGTGCTCGT CGCATGCGCG AGCAGCTTGT CCGCCGCTCA GTCCGCTCAG
CCGCCCACCC CCGCGCCCGA TCCCTACTTC CGCTTGCGCG ACACCACGCT CGGCTACCAT
GGCGTCGCCG AGGATTTCAC CGACCTCCGG GAAATTCGCC TCGGCTGGTT CGGACCAAGC
GACACCGCCG ATCCGCTGCA CGGCGACTTC TGGTGGGCCG CCAATTTCGC GGTCGAAGAC
GCCAACCACC ATCCAACGCC GGCCGAACCT TCGGCGTTTG CGGCGCTGCC CATCCGGCTC
GTGCCGTGTT GGGCGCCGGA TCCGTGGCGC GCGGGAGTCT CGCTGCTTGC GCGCATGGTC
TACGACGAGC AACCGCTGGC ACTGATCGGC TCAGTCGATT CTGCGTCCAC GCACCTGGCC
GAACAGATCG TCGCAAAGGC CCAGCTACCG CTCATCAGTC CTATCGCGAC CGACAAGACC
GCGACGCTCG CGGGTGTCGC CTGGATGTTT TCCTGCGCGC CCGACGACAC GGCCGTCGCC
CGCGTGCTCG TCGACGATGT TCTCGCCGCG GCCTCCGACG CGGATCGATC AACCACCGAT
GCCCCGGCGA TCACCAGCCG ACCACGACCG AACTCGGTAG GGAATACCCC AACGCCCGCC
GGCAATCGGC ATTCGGCATC CGGCAATCGC AAGTCCCCTC TCGTCCTGCT CGCGACGACC
GACCACGAAT CTCGCGCGGC CGCCCGCGAG GTCATGCGTG AACTGTCCCG TCGCGGCCGA
CTGCCGGAGT TTCGATTCGA TCTGCCTCCC GACGTGCCAG ACGCGACCGA GCCGTTGCGC
AGTGTCCGTT CGTCGCATCC CGCCACGGTG ATCGTGATCG CCAACGCGCC GGACTCCGCG
CGGCTGGTCC GCACGGTGCG CGAGCAACTG GGCAACATTC CCGTGGTCGG CGGCCCCGCG
ATGGGGCGCA CCCGTTTTGT CGAACTCGCC GGCCCGGCGG CCGAAGGCGT GCGGTTCCCG
CTCCTCTTCG CGCTCGACGC GCGGGACGAA GCAACGGCCC GTTTCACCAC CCGCTTCCTC
GCGGCGCGCC ATCACGAGCC CGACTACGCG GCGGCGCTCG CCTACGATTC CACCCGGCTG
CTCATCGCCT CGATCCGTCG CGCCGGCCCC AACCGCGCGC GGATCCGCGA AGCCCTTGTC
CAGTTCAGCC CGTGGATCGG CATCGCCGGC CCAATTTCGT TCGATGGCAC CGGCCAAAAT
CGCCGCGCCG ATCTTCGGCT CGGCACGATC CGCGCCGGCG TGGTGGCGGC GCTCAACCCG
CCACCGACGA GCGACACGGT CACCGACGTC GCCACTATCA GCGGACTAAT GGGAACGCGA
CGCCCCCGTC GCGTTCACCG GCGACGAGGG CGGCGCCGCT CCATCACACC TCCTTCAGTC
GGTGTGTCGC CAAACCACAG TTGCATCACG AAATGA
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| Protein sequence | MILQSRDSFF SRRLLTACWC SLLFVLVACA SSLSAAQSAQ PPTPAPDPYF RLRDTTLGYH
GVAEDFTDLR EIRLGWFGPS DTADPLHGDF WWAANFAVED ANHHPTPAEP SAFAALPIRL
VPCWAPDPWR AGVSLLARMV YDEQPLALIG SVDSASTHLA EQIVAKAQLP LISPIATDKT
ATLAGVAWMF SCAPDDTAVA RVLVDDVLAA ASDADRSTTD APAITSRPRP NSVGNTPTPA
GNRHSASGNR KSPLVLLATT DHESRAAARE VMRELSRRGR LPEFRFDLPP DVPDATEPLR
SVRSSHPATV IVIANAPDSA RLVRTVREQL GNIPVVGGPA MGRTRFVELA GPAAEGVRFP
LLFALDARDE ATARFTTRFL AARHHEPDYA AALAYDSTRL LIASIRRAGP NRARIREALV
QFSPWIGIAG PISFDGTGQN RRADLRLGTI RAGVVAALNP PPTSDTVTDV ATISGLMGTR
RPRRVHRRRG RRRSITPPSV GVSPNHSCIT K
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