| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2929 |
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| Symbol | |
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| ID | 6204328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3750054 |
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| End bp | 3752477 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692594 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001819810 |
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| Protein GI | 182414744 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.113519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTC GATCTGCGCT TTTCCTCGGC CTCGCCCTGC TTCCCCTGCT CGCCCGCGGT
CAACTCTCGT GCGGCGTGGC CGAACCGCTC GACGAGGGCT GGACTTTTCT GCTCCGCGAT
CAGCCGGAGG CGCGGCAACC GGAATTCGAC GACCGCTCCT GGTCCCCGGT GAACCTGCCG
CACGACTGGA GCGTGCAGGG CCGGCTCAGT CCGGAACTGG CCAGCTGCAC CGGCTACCTG
CCTGGCGGAG TCGGCTGGTA TCGGAAGCAG CTGACGATTC CCGCGCGGCC GGGCGGCGAG
AAGGTCTGGC TCTACTTCGA AGGCGTCTAC AATCGAAGCG AGGTTTACTT CAATGGTCAC
TTCCTCGGTC GCCGCCCGAA CGGTTACGTT TCGTTCTACT ATGATGCGAC TCCGTACGTA
CGGTTCGACC AGGAGAACAC GATCGCGGTG CGCGTCGACC ACAGCCGCTC GGCCGACTCG
CGCTGGTACA CCGGCTCCGG CATTTATCGT CGGGTCCATC TGATCCGCAC CGGCGCGGTA
CACCTCGCCC CCTGGGGAGT GTTTGCCCGG TGCGAAATCA CCCCCGAGCA CATCGCGAGC
CTCGTGATCG ACACCGAAAT CCAGAACAGC ACTGATCGTG AAGTGCCCGC CGAAATCCGG
CACGAGCTCC GCTCTGCCGA AGGCGAGGTG GTGGCCGCCG CGACGGACAA GGTGCTGGTC
GGCGCCCAAA CGGATCGCAC CGCCCGCGTC ACGCTCGGCT GGCGCGAACC GCGGCGCTGG
AGTGTCGACC ACCCGTACCT GTATCAGCTC CGGACGACGC TCCTGCTCGA TGGCCGGGTG
ATCGACGAGA CCACGACCCG CACCGGCGTG CGCACGCTGG CGTTCGATCC TGCGCGCGGC
TTCATGCTGA ACGGAACCAG CCTGAAGCTG AAAGGCGTCT GCCTGCACCA CGATGCCGGC
GTGCTCGGCG CGGCGGTGCC GCGCGAAGTC TGGCGACACC GGCTGCAGAC GTTGAAGCGC
ATCGGGGGCA ACGCCGTACG CATGAGCCAC AATCCCCAGG CCCCCGAGCT CTACGAGCTC
TGCGACGAGC TCGGCTTGCT CGTGCTCGAC GAGGCATTCG ACGAGTGGGA GTTTCCCAAA
AGGAAATGGC TGCGCGGCTG GAATGTCGGC GAACCCGGCT TTGAGGGCTC GTATGACTTC
TTCGAGGAAT GGAGCGCCCG GGACGTCGCG GACATGGTCC GACGCGATCG TAATCATCCA
TCGGTCTTCG CCTGGAGCAT TGGCAATGAG GTCGATTATC CCAACGACCC CTACTCGCAT
CCGATCCTGG ACGGCGATGG ATCGCGCATC AGCCAGCCGA TGTTTGGCGG CTACAAGCCA
AATCAACCCG ACGCCCGGCG GCTCGGCGCG ATCGCTCAGC GGCTCGCGGC CGAAGTGAAA
AAGCACGACC CATCGCGTCC GGTGACAGCG GCGCTCGCCG GCGTGGTGAT GTCGAACGAA
ACCGATTATC CCGGCGCGCT GGATATCGTG GGTTACAACT ACACCGAGGA CCGGTACGCG
ATCGACCATC AGAAATATCC GCAACGCGTG CTGTACGGCA GCGAGAATCG CCACACGCGG
AAGGCGTGGT CCGCCGTCGC GGACAACGCT TTCATCTTCG GCCAGTTTCT CTGGACCGGG
ATCGATTATC TCGGCGAAGC GGGTCCGTGG CCATCGCGGG GCGCGAGCTC CGGCCTGCTC
GATCTGACCG GCGCCGTGAA ACCGCGCGGC CATTTTCGCG AAGCGCTGTG GTCCGACCAA
CCGGTTCTCC ACCTTGGCAC CATGCGCCAG CCCAAGGACG ACCGGAAATC GATCGATGCG
TGGCCGGTTT GGAACTACGC GCCGGGCACG CCGGTGCGGG TGCTCTGCTA CACCAACGCC
GCCACCGCGA GTCTGCGGCT CAACGGCCAG GCCATCGGTG AGGAGAAGCC GTATGATCCG
GAAACGGGCG TGATCGCATG GGATATTCCG TTCGCCGCCG GAGAACTCGA GGCGATCGGC
CGGGACGCCA CCGGTGCGGA AATTTGCCGC AATCGACTCC GGTCCGCCAC TGCCCCCGCC
ACGATGGAGC TGACCTGCGC CGACTCCGTG CTGGATCGGC ACCGCGGTGT CGCGCTGATC
GCGTTGCAGA TGGTGGATCA GCACGGCGTG CCCGTGATGG ACGCCGAGCA CGAAGTCACC
TGCAGCGTGG AGGGTCCGGC GCGGCTGCTC GGACTCGAAG CGGGCGACAT GCGTGACGTC
AGCGACTACA CCGATGCCGT GCACCGCGTT TTCCACGGGC GGATCGTAGC CTACGTCCAA
GCAACGGGGA CCGAAGGTCC GGTCCGCGTG CGCTTCACGG CCGCGGAGCT GCCCGAAGCC
GTGATCACGC TGGCGGCTCG GTAA
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| Protein sequence | MNARSALFLG LALLPLLARG QLSCGVAEPL DEGWTFLLRD QPEARQPEFD DRSWSPVNLP
HDWSVQGRLS PELASCTGYL PGGVGWYRKQ LTIPARPGGE KVWLYFEGVY NRSEVYFNGH
FLGRRPNGYV SFYYDATPYV RFDQENTIAV RVDHSRSADS RWYTGSGIYR RVHLIRTGAV
HLAPWGVFAR CEITPEHIAS LVIDTEIQNS TDREVPAEIR HELRSAEGEV VAAATDKVLV
GAQTDRTARV TLGWREPRRW SVDHPYLYQL RTTLLLDGRV IDETTTRTGV RTLAFDPARG
FMLNGTSLKL KGVCLHHDAG VLGAAVPREV WRHRLQTLKR IGGNAVRMSH NPQAPELYEL
CDELGLLVLD EAFDEWEFPK RKWLRGWNVG EPGFEGSYDF FEEWSARDVA DMVRRDRNHP
SVFAWSIGNE VDYPNDPYSH PILDGDGSRI SQPMFGGYKP NQPDARRLGA IAQRLAAEVK
KHDPSRPVTA ALAGVVMSNE TDYPGALDIV GYNYTEDRYA IDHQKYPQRV LYGSENRHTR
KAWSAVADNA FIFGQFLWTG IDYLGEAGPW PSRGASSGLL DLTGAVKPRG HFREALWSDQ
PVLHLGTMRQ PKDDRKSIDA WPVWNYAPGT PVRVLCYTNA ATASLRLNGQ AIGEEKPYDP
ETGVIAWDIP FAAGELEAIG RDATGAEICR NRLRSATAPA TMELTCADSV LDRHRGVALI
ALQMVDQHGV PVMDAEHEVT CSVEGPARLL GLEAGDMRDV SDYTDAVHRV FHGRIVAYVQ
ATGTEGPVRV RFTAAELPEA VITLAAR
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