| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2927 |
|---|
| Symbol | |
|---|
| ID | 6204437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3743587 |
|---|
| End bp | 3745740 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692592 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001819808 |
|---|
| Protein GI | 182414742 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.340579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACG CCCCTGGATT CCGGCATTCG ATCCGGCACG CGCGGTGGCT CTCCGTCCTG
TTGACACTGG TCGCGGCGGG TCAGTCCGTG ACGGCGATCG CCACCGAGAC CGTTCTTACC
ACCGCGGCGC AGGTCCGCGC GTTGACCGAG GAGGAAGCCC GCCACGCCGT ACCGGTGCGG
CTGCAGGGCG TGTTCATGGG CGAAGCGGAT CCGGAAGGCA TCGCCTTCGT GATTCAGGAC
CAAACCGAGG GCATCTATGT GCAAGGCCCC GCGGAACTCG TGGCGGGACT GGTTCGCGGC
GATCTGCTGC AGATCGAGGG TGTCACCGAT CCCGGCGGCT TCGCCCCCTA CGTGGTGGCC
CGCAACATCA CGAAAACGGG CCAGGGGCCG ATCCCGGAAC CGGCGCGCGT TTCGCTCGAG
GAATTGAGCT CCGGACAAAT GGACGCGAAG TGGATCGAAG TGTCAGGCAT CGTGCGCAGC
GTCGACCCGA AGCTGCCCAG CGACGTCGCG CGGCCGCCTC CGGGCACGCG CTACGCCGTC
CCCTCTTCCG CCGGCGTGTC CGCGTCCAGT GAGGGCAAGG TGAAATTCAA ACTCGCCTCG
GGCGGCGCCC GGTTGGTCGT GCAGGTCTGC GGCGAATTCA ATCCCGAGGA CTACATCGAC
GCCGAAGTCC GGCTGCGCGG GCTGTGCTTC AACTTGCACA ATCGCAATCG CCAGTTCGTG
CGCCCGTTCG TGCAGGTGCC CCGCGGCGTG GAGGTGATCC GGGAAAAGCC GCCGCCGGAA
AGACCCTTCG ACGGCGAACC GTATCCGGTC GGCAACTTGC TTCGCTTCGA GCAGCTCACC
GGCCAGCAGG GGCATCGCGT CCACGTGCGC GGCATCGTAC TCCACCACCA GCCGGGTTAC
GCGCTGTGGA TCCGCGACCG CGACCACAGC CTGCGCATCG ATACGACGCA GGCCCATGAA
CTCCGGCCGG GCGACGAGGT GGACGTGGTC GGGTTCCCCG CCTTGCGCGA CTACAGCGCG
GAACTCGAGG ACGGCATTTA CCGCAAGCGC GGAACGCAGG CGCCGCCCGC GCCGCACGTG
CTGACGGACG TCTCCAGCGC GCTGCGGCAG GACGGCGATC TGGTGCAGCT GGACGCACGG
CTCGCCGAAC TACGGCGCTT CCCCGACAGC GTGGCGCTCG TGCTGGACTG GCACGACACC
GCGATTCGCG CCCAGCTCCG GCTGCCCGAA CACACCACCG CGCCCACCGG CTGGTTGCCC
GGCAGCCTGG TTCGCGTTTC AGGCGTGTGC TCGGTGGTGA CCGACGAGGC CGGTCCGCTC
GGCGGCTTGT GGGAACCGCG CTCCTTTCAA CTGCTGCTCC GTTCCGCCGC GGATCTTGCG
GTCGTTCAAC CGCCCTCCTG GTGGAACGCG GAGCGGGTCG TCTGGATCTT GTCCGGATCG
CTCGTCCTCG CGGTCGCGGC GGTCGCGGCC GTGGTCTTCG CGTCCCGCCG GCGGCTGCAC
GAGCAGGAGC GGCGCCGTGC GATGGCCGAG ACAGAATTCG CCGCGATCCT GAATGAACGC
AACCGCGTCG CGCGCGAAAT CCACGACACG CTGTCCCAGG GGCTGGGCGC GATCTCTGTT
CAACTGGAAC TGGCGCGCAC GCACGCCGGC GAGATGAGCG CACCAGTCCG CGATCATCTC
GGCCTCGCGC ACAAGCTCGC CCGCGCCGCG CTGGCGGATG CGCGGGATTC GATCTGGAAC
ATGCGTTCCC AAGTACTCGA GCGATGCGAT CTCGGGGAAG CCTTGAACGA GATCCTGACG
CAGACCACCG AGGGCACGCG CGTGCAGCCG GGGATGCAGG TGGAAGGGCT GAGCCGCCGG
CTGCCGCCCG TCGTGGAAAA CAACCTGCTC CGCATCGGTC AGGAAGCGAT CACCAACGCC
AGCAAACACG CGCACCCCAC CCGCATCGAC GTGCGGCTGG CGTTCGATGG CCGCACCGTG
CGGCTCACCG TCGAGGACGA CGGCGTCGGC TTCGTCAACG GCACTCAGCC CAAGGGGAGC
CGCAGCTTCG GGTTGGTCGG CATGAAGGAA CGCGCACAGT TGTTGGGTGG CACGGTGCAG
ATCACCAGCG CTCCCGGACA AGGCACTCGC GTCACCGTCG TTGTCACCGT CTAG
|
|---|
| Protein sequence | MINAPGFRHS IRHARWLSVL LTLVAAGQSV TAIATETVLT TAAQVRALTE EEARHAVPVR
LQGVFMGEAD PEGIAFVIQD QTEGIYVQGP AELVAGLVRG DLLQIEGVTD PGGFAPYVVA
RNITKTGQGP IPEPARVSLE ELSSGQMDAK WIEVSGIVRS VDPKLPSDVA RPPPGTRYAV
PSSAGVSASS EGKVKFKLAS GGARLVVQVC GEFNPEDYID AEVRLRGLCF NLHNRNRQFV
RPFVQVPRGV EVIREKPPPE RPFDGEPYPV GNLLRFEQLT GQQGHRVHVR GIVLHHQPGY
ALWIRDRDHS LRIDTTQAHE LRPGDEVDVV GFPALRDYSA ELEDGIYRKR GTQAPPAPHV
LTDVSSALRQ DGDLVQLDAR LAELRRFPDS VALVLDWHDT AIRAQLRLPE HTTAPTGWLP
GSLVRVSGVC SVVTDEAGPL GGLWEPRSFQ LLLRSAADLA VVQPPSWWNA ERVVWILSGS
LVLAVAAVAA VVFASRRRLH EQERRRAMAE TEFAAILNER NRVAREIHDT LSQGLGAISV
QLELARTHAG EMSAPVRDHL GLAHKLARAA LADARDSIWN MRSQVLERCD LGEALNEILT
QTTEGTRVQP GMQVEGLSRR LPPVVENNLL RIGQEAITNA SKHAHPTRID VRLAFDGRTV
RLTVEDDGVG FVNGTQPKGS RSFGLVGMKE RAQLLGGTVQ ITSAPGQGTR VTVVVTV
|
|---|
| |