Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2923 |
Symbol | tdh |
ID | 6207125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3738382 |
End bp | 3739431 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641692588 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_001819804 |
Protein GI | 182414738 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTCC CCACGACCAT GCAGGCCATC GCCAAGCTGA AGCCCGGCCC CGGGCTCAAC CTCATCGAAG TCCCGGTGCC GGTGCCGGGA ATCAACGATG TGCTGATCCG AATCAAGCGC ACGTCGATCT GCGGCACGGA CATCCACATC TACAACTGGG ACGCGTGGGC CGCGAAGACG ATTCCGGCGC CGATGGTGAT CGGTCACGAG TTCGTCGGCG AAGTCGCCGC GGTCGGCTCA AACGTCACCA CCTTCCAGAT CGGTGAACTC GTCGACGGCG AGGGCCACAT CGTGTGCGGT GTCTGCCGCA ACTGCCTCGC TGGGCGCCGG CATCTCTGCA AGGACACCAA GGGCGTCGGC GTGAACCGTC CCGGCGCCTT TGCCGAATAC CTCTGTCTCC CCTCCAGCAA CGCCGTCAAG GTCGACCCGA CCATCTCGCT CGATGTGCTG TCGTGCTTCG ACCCGCTGGG CAACGCGACG CACACCGCGC TGCAATACGA TCTCGTCGGC GAGGACGTCC TCATCACCGG CGCCGGCCCG ATCGGCTGCA TGGCCGCGGC GATCGCGCAG CAGGCCGGCG CGCGCAAAGT CGTCGTTACT GACGTCAATC CCGACCGGCT CGCCCTGGCC CAGCGCATGG GCGCCACGCG CGTGGTTGAC GTGTCCAAGG AAAAACTTCC CGACGTGCAG CACGAGATCG GCATGAAGGA GGGCTTCGAC GTCGGGCTCG AGATGTCCGG CAATCCGCGC GCACTGAATG ACATGATCGA CAACATGGCG CACGGCGGCC GCATCGCCCT GCTCGGCATC ATGCCTGAGC GTGCCGCCGT CGATTGGAAC AAGGTTGTCT TCAACATGCT CACGATCCGC GGCATCTACG GCCGCGAGAT CTACGCCACG TGGTACAAGA TGCAGTCGCT GATCCAGCGC GGACTCGACA TCACCCCCGT GATCACCCAC CGGATGCCGT TCACGGACTT CGAGCGCGGG TTCGAGCTGA TGCGCTCGGG CAAGAGCGGC AAGATTGTCC TCAATTGGGA GGTCGCATGA
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Protein sequence | MHLPTTMQAI AKLKPGPGLN LIEVPVPVPG INDVLIRIKR TSICGTDIHI YNWDAWAAKT IPAPMVIGHE FVGEVAAVGS NVTTFQIGEL VDGEGHIVCG VCRNCLAGRR HLCKDTKGVG VNRPGAFAEY LCLPSSNAVK VDPTISLDVL SCFDPLGNAT HTALQYDLVG EDVLITGAGP IGCMAAAIAQ QAGARKVVVT DVNPDRLALA QRMGATRVVD VSKEKLPDVQ HEIGMKEGFD VGLEMSGNPR ALNDMIDNMA HGGRIALLGI MPERAAVDWN KVVFNMLTIR GIYGREIYAT WYKMQSLIQR GLDITPVITH RMPFTDFERG FELMRSGKSG KIVLNWEVA
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