| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2905 |
|---|
| Symbol | |
|---|
| ID | 6205020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3713078 |
|---|
| End bp | 3714169 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641692570 |
|---|
| Product | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_001819786 |
|---|
| Protein GI | 182414720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.759852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATC GGGCGCGCCC GGCCTACGCG TCGCTGCGGT CAAGTCCGCT CGTGCCCACC
AACGCCCTCT TTCTCATGGC CAGGATCAAA ATTTGTCTCG CGCTGCTGGT GCTGCTCACC
GGGGTGAGCC GCGCCGGGCC CGCCCGGCAA CACGAGCTGT ATGTCTGCGC GACGATCAGC
CGCAACTATG TCGTTGGCTC GAAGCTTACG ACCCTGAGTG GCCTGTATCA TCGTGCTCCG
GACGGCAGCT ACGTTCACTT TGGCGTGAAT TTCCCCGGGA TCTTCAGTCT CGCGATGGAT
CCACGCGATC CGCGGGTGCT CTATGTGGCG TCGTTGAACG GTGCGCTGTG CAGCAGGGAT
GGCGGCGAGA CTTGGCGCAT TGGCACGAGC TGGGACATGA CGGAGCCGAA GGACATTTCG
GTCGATCCCC ACGCGCCGGA CCACGTGTAC CTTGCGCTGC CCGACGGCAT CGCGGTGTCG
CCCGACCGGG GCGCGACCTG GCCGCGGCGC GAAAACGGGC TGCCGGAGCG TGGTAAGTAC
ACGCAGGTCC TCAAGGTGGA TCGCACCCGC GCCGGCCGCG CGCTCGCCGG CTGCGAGTCG
GGCATCTACC TGACCGAGAA TACGGCGCAG TCGTGGCGGC AGGTTTTCAG CACGCGGACC
ACGATCACGG ATCTGCGGCA GTCGCCGCAC GATCCGCAGC ACTGGCTCGC GACCACGCAG
AGTGACGGCG CGCTCCAGTC GCAGGATGGC GGGCTCACCT GGACGCGCTT CGAAGGAGTG
CCGTCCGCGG AGGCGCTCTA CAACGTCGCG TTTGACGCCG CGAACGCGCG ACGGTTCGCG
ATCGGCAGCT GGACCTATGG CGTCCTCGTG ACCGAAGACG GCGGGGCAAC CTGGCACGAA
CGCAATGCCG GTCTCCCGGA CGGGCACTGT GTTTTCCGCG TCGGGATCGA TCCGGACGAC
GGGCGGCTCT ACGCCGCGGT GTACAAGGAG GCGCTGTTCG AGTCGCGGGA CTTCGGTCGC
ACGTGGCAAA AGGCCGGGTT GGAGGGCTCC ACCGTCTACA ACTTCGTCTT CGTGCCCAAG
GCGGCGCAGT GA
|
|---|
| Protein sequence | MSNRARPAYA SLRSSPLVPT NALFLMARIK ICLALLVLLT GVSRAGPARQ HELYVCATIS
RNYVVGSKLT TLSGLYHRAP DGSYVHFGVN FPGIFSLAMD PRDPRVLYVA SLNGALCSRD
GGETWRIGTS WDMTEPKDIS VDPHAPDHVY LALPDGIAVS PDRGATWPRR ENGLPERGKY
TQVLKVDRTR AGRALAGCES GIYLTENTAQ SWRQVFSTRT TITDLRQSPH DPQHWLATTQ
SDGALQSQDG GLTWTRFEGV PSAEALYNVA FDAANARRFA IGSWTYGVLV TEDGGATWHE
RNAGLPDGHC VFRVGIDPDD GRLYAAVYKE ALFESRDFGR TWQKAGLEGS TVYNFVFVPK
AAQ
|
|---|
| |