| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2871 |
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| Symbol | |
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| ID | 6208445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3668548 |
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| End bp | 3670266 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692536 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001819752 |
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| Protein GI | 182414686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0957235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.927899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTTGG TCTCCGCCCT GCTCGGAAGC GTCTTCCCCG CCACGATCGC CCCTGGCGCC
TGGAGTGAAC CCGGCGTTAT CATCACGGGA GTGCTGCTGG CGATTCCCGT GCTCGTCACC
CTGGCACTGC TGGGACAGAA ATTCCGCCGC TGGGCCGGCC CTCGCCGAAG CGCCGGGCCG
GTGAGCGTCG CCGTCGCCGG GCGCGACCCG CTGTTCGAGG CGGCAGTGAA CGAGCCCAGC
ACGAGCACGA ATGGCCACGG GGTGATCAGC AACGTCGATG AGGCGGGAAC GGTGCGCTTC
GTGCCCGCGA AGCAGAAAGC CGTGTCGCGG CCCGGCCTCG ATCCGGGTCT CGCGCGCCTG
CTGCTCTGGT ATCTCGGCAC GGCGACATTC TGGCTGCTTT TCGGCACCAC CGTTGGCGAG
TATTTGGGGA TCAAATTCGT GGCACCGGAC GTGGATCGGG TCAGCTGGTT GAGTTTCGGT
CGCCTGCGGC CGGTCCACAC CAACGCCGTA TTCTGGGGCT GGGCCTCGCT GGCGATGGCG
GGCCTGGGCT TCTACGTCAC CAGCGTCGTG AGCAACGCCC CGCTGAAAAG CCTGCGCCGC
GGCTGGTGGT CACTCGGGTT AATCAATGCG GCCGTGATCC TCGGCAGCGT GGCGTTGATG
GCCGGGGTGA ACAATGGGGG CGGCGAATAT CGCGAGTACA TCTGGCCGGT GATGGCGCTC
TTCGCCGCGG GCATCCTGCT CGCGTTGACC AATCTGATCG GCACGATCGC CCAGCGGCGC
AGCCGCGAGA TCTACATCTC GAGCTGGTAC ATCGTCGCCG CGGTGATGTT CGTCGCGGTC
ATCGTCGTCG TCGCGTACAC GCCCTTCTGG CAGCGCGGGC TCGGCGAGAC GATCATCCAG
GGCTACTACA TGCACCAAGG CGTCGGCATG TGGTTCATGA TGTTCCTGCT GGGGCTCACG
TATTATTTCC TGCCGCAGCA GCTCAACACG CCGATCTTCT CCTACAGTCT CGGTATCCTG
GCATTCTGGA CACAGATCCT CTTCTACACG CTGATCGGCA CGCACCACTT CGTATTCAGC
TCGATTCCGT GGTCACTGCA GACCGTCGCG ATCGTGGCCA GCGTCGGGAT GGTGATCCCG
GTGGTGGCGG GTACTGCGAA CTTCCTGCTC ACGTTCCGCG GCAGCTTTCA CCGGATCGGC
AGCAGCTACA CCCTGCCCTT CTTTCTCGTC GGGGTCGTCT TCTACTTCAC CGGCTCGATG
CAAGGCACCG CGGAAGCGTT CCGGTCGACC AATCTGTTCT GGCACTTCAC CGACTTCACG
GTCGCGCACT CGCACCTCAC AATGTACGGC ATCATCACGT TCCTGCTGTG GGGCTGTATC
TACGCGACGG TGCCGCGGCT GACGGGTCGC GAACCGCCGC AGGCCACGGT CGGGGCGCAT
TTCTGGATGG CGCTGCTGGG ACTGCTGTTC TACACGGTGC CGCTGATGAT CGGCGGGACC
CTGCGCGGCC TCGCGTGGCT GGAGGGAAAG CCGTTCATCG ACAGCGTTGT GCTCATGGCG
CCCTACTGGC TGTGGCGCGC GATCGGCGGG ACGCTCATGT GGATCTCGCA CTGGGTGTTC
GCCTATAACC TCTATCGCAT GATCGCGGGT CCGCGCGCGG TCGCGTCCAC CGCGGCCCGC
TCTCCTCGCG ATCCATTCCC CGCGGAGGTG ACGGCATGA
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| Protein sequence | MVLVSALLGS VFPATIAPGA WSEPGVIITG VLLAIPVLVT LALLGQKFRR WAGPRRSAGP
VSVAVAGRDP LFEAAVNEPS TSTNGHGVIS NVDEAGTVRF VPAKQKAVSR PGLDPGLARL
LLWYLGTATF WLLFGTTVGE YLGIKFVAPD VDRVSWLSFG RLRPVHTNAV FWGWASLAMA
GLGFYVTSVV SNAPLKSLRR GWWSLGLINA AVILGSVALM AGVNNGGGEY REYIWPVMAL
FAAGILLALT NLIGTIAQRR SREIYISSWY IVAAVMFVAV IVVVAYTPFW QRGLGETIIQ
GYYMHQGVGM WFMMFLLGLT YYFLPQQLNT PIFSYSLGIL AFWTQILFYT LIGTHHFVFS
SIPWSLQTVA IVASVGMVIP VVAGTANFLL TFRGSFHRIG SSYTLPFFLV GVVFYFTGSM
QGTAEAFRST NLFWHFTDFT VAHSHLTMYG IITFLLWGCI YATVPRLTGR EPPQATVGAH
FWMALLGLLF YTVPLMIGGT LRGLAWLEGK PFIDSVVLMA PYWLWRAIGG TLMWISHWVF
AYNLYRMIAG PRAVASTAAR SPRDPFPAEV TA
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