Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2854 |
Symbol | |
ID | 6204811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3647370 |
End bp | 3651248 |
Gene Length | 3879 bp |
Protein Length | 1292 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692518 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_001819735 |
Protein GI | 182414669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0274394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.093276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTTC CACAATTGGT GCGCCTGGCA GTGCTGACGT CCATTCTGCC GGCGCTTGCG TTCGACGGTG CGGCGCAGCC TGCGCCCGCC TATACGTTCA CGACCTACGT CGGCCGCAAC AATATCGGCT ACGTCGACGG CGAAGGCACC CAGGCTCGGT TCCACGAACC GGCCGGACTC GCCTGTGATG CCGATGGCAA CCTTTATGTG GTTGATCCGG GTACCAACCT GATTCGCAAG ATCACGCCCG CCGCCTCGGT GAGCACGTTT GCCGGAACGC CGACAGGGTG GGGCTTGGTC GACGGACCCG CCGCGAGCGC CCGCTTCGGC CTGCCTCAGG GCGTCGCGGT CGGTGCCGAC GGTACGGTGT ACATTGCCGA CACCGGCAAC GCCGCCATTC GGATCATCAC CCCGGATGGC AGCGTCCGCA TTCTGGCCGG AGGGCGGAGT GGCAGCCAGG ATGGCTACGG CACCGGAGCC ACCTTCAATC TGCCCGAAGC CGTGGCGGTG AATGCGGCCG GTGTCGTGTA CGTCGCGGAC TCGGGCAACA ACACCGTGCG ACGGATCGAA GAGGGCAACG TTACGACGCT CGCGGGCTTG GCGGGAGCCT CTGCCGGGGC GGTGGACGGG GCCGGCTCGG ACGCCCGCTT TAATGGCCCG AAGGGAATTG CGGTCGATGC GAACGGGACG GTCTACGTGG CGGACACTTC AAATCATATC ATTCGCAAGG TAACGCCGTC CGGTGTGGTC ACGACGCTGG CGGGATCGCC CGGGATCAGC GGCAACAGCG ACGGAGCGGG TGACGCTGCA CGCTTCAATG CACCCACCGA CATCGCAGTG GACGACGCGG GGACGATCTA TGTGGTTGAT CAGAGCGGCT CGCTCCGGAA GATCACACCC GAGGGGGTGG TAACGAGTCT CGCCTCGGGT TTCAGCTATC CTCGCGGCGT GGCGTTCGAT CGAAGCAGCG GAGTGTTTTT TGTGGCGGAC ACAGGGCACC ACGTGATCAA GCGGGTCACA CCCAATGGGA GTGTTACCGT GTTTGCCGGC GCCGACGTGC TGGTGCGGAG CGCTGACGGC GTGGGGCTCA ATGCGCAATT CACGTCACCG CGCGGGTTGA CCGTGGCAGC CGACGGCACC GTGTTCGTCG CCGACAGCAA TGCGTATGTC ATCCGCAAGG TGACGCCGGG ACTGCTGGTG ACCACCTGGG CGGGCAGTCT GGTGCGGCCG ATCTATCAGA CAGTTGACGG CCAGGGCAGC AACGCAGGTT TCGGTAATCC GACAGGCATT GCGGTGGATG CGGCAGGCAA TCTCTTCGTT GCCGATTTCA AGGCCACGAT TCGCAAGATC GACGCCACCG GCTACGTCTC GACCGTGGCG GGAGCACATG GCCTCGACGG GAGTCTGGAC GGGGAAAAGA CCGCGGCCCG GTTCAATGCG CCCCACGGGC TTGCGGTGGA CCAGCACGGG AATCTTTACG TTGCCGACAC CTTCAACCAC TCGATTCGCA AGATCGACGC GGCCGGGCAG GTCACCACTC CGTATGGTGT CTCCGGCGTC GAGGGCACGG TTGATGGCAT CGGCAATGCC GCGAGATTTG GTTCACCAAC CGCGCTGGCG TTCGATCGGG ACGGAAGTCT TTTCGTGGCC GACGGCCACC GCGTGCGCCG GATCTCGCCC GAGGGCGTGG TGACCACGGT GGCGGGCACG GCGAATGCCA CCGGCAGCAT CGACGGGGTG GGCGCGGCCG CGACGTTTGG GGAAATTAAG GGACTCGCGG TGGACCGGGC CGGGAATGTT TTCGTCGCGG AGAACACCAC GCACGTGATC CGAAGAATCA CGCCGGACGG CACGGTCGTC ACCATCGGCG GTCTCGCCGG CAGCATCGGC ACGGCGGATG GAGTCGGCAG TGCGGCGCGG TTCAACGAGC CGTGGGGACT GGCGCTGGAT CGGTTCGGCC ACTTGTACAT TGTCGATTCG GGCAACAACA CGATCCGCAA GGGCGTGATT GTCGGCGCGA CCGCACCGGC GATCACCAAG GACCCGGTGG CGAAGGCCGC CGGCGCCGGC CGGCAGGCGA GCTTCACCCT CACCGCCACG GGGCTACCGG CGCCCCAGTT CCAGTGGCAG CGAAAACGCG CGGGCGAAAG CGATTTCGTC GCGCTGAGTG AAATCGCCGA GTTCAGCGGG GTCGAGACGG CCACGCTGAC GGTCACCACG GCCGCCGCCA TGACGGGCGA TCAGTTCCGT TGTGTGGTGG AGAATGGCAT CGGTCCGGCG GTGACCTCCG GGACGGCGAC GCTGACAGTA GTTCCGCCGC CGAGCTTCAG CAGTGAGGCC GAGACGACCT TCACAGTCGG AGCAGCGGGA AGGTTCCAGG TCGCGGCGGC GGGTGCCACG GTGCTGGCCT TGAAGTCCGG CGCGTTGCCC GCGTGGGCGC ACTTCGATCC GGCAACCGGC ATTCTCTCGG GCACGCCGAC GGAACTGGCG GCGCCGTTGC AGCTCGTGTT CGAGGCGGGC AACGCGGCGG TGACCCCGAC CGAGCAACCG TTCACCCTGA AGATCAGCGC CGGGCCGCTC GTCGTCGCGG ATCCGGTAGC GCACACCGCC AACGCCGGTG CGACGGCGAT TCTGTCGGTG GACGCGGCGG GCGTGGCGCC GTTGAGCTAT CGCTGGACCA AGGACGGCGT ACCGGTCGTG AACTCAACGC GCATCTCCGG CGCGGACGGA CCGGTGCTGG CGCTGGGTCG GACCCAGCTC GCCGACGGCG GCACTTACGC GGTCACGGTC ACCGGGCCGG ACGGCACGGC CGTGACGTCG CGCGCGGCCG TGCTTTCGGT GGCGCAACCC CCGACGATCT CCACGGCACC GGCCAGTGCG ATTGTCGCGT CCGGCGCGCG CGCCAACTTC ACTGTCGCGG CCACCAGCAA CTCGCCGCTA GCGTTTCAAT GGCTCTATAA CGGCGATCCG GTCGCCGGCG AAAACGCGTC GATGTATGCC ATTGCGGCAG TGAATCCCGG CTGGTCGGGA CTGTACTCGG TGCGGGTGAG CGACGCGGCG ACAGCGGTCG AGACCACGCC GGTGATCCTA GGCGTTCCAA TCGATCAGAA GCTGTGGGGA TGGGGCAGTG AGGCAGGGGC GGACATCGTT CATCCCAATG GCAATCTCTA TGACCAGGTG CTGCTCACGA GTTCGACGGT GGCGCTGAAG GCCGATCCAG GGCAGGTCAC GCGGGTTTCG TTCATCGATC TGAGTGATGA CATCGTGCAG GTTGAATTCT CCGGCGCGGG GACGCTGCAC GTCCAGCTCA AGAATGCGGC GGCGCCCGCC GCGCCGCTGT TCTACAATCA GAACGTGAGT TACGTGAAGG GCCACGCCGG CATCACGATC GTTGGCGCGG ACGAAACGAC CCACCTCTCG GTGTTTTCGG TGGGTCGGGT GACGGCGGTG AATCAGGGCC TGTTCCGGCC GGAGGTGAAC TACGATGGCA TGGCCGACAT CGCGTTCATC GCAATCAGCA GCGCCAACGG AAAGTTCGGC GGCCTCTACG CGGGCAACGC CGTATGCTCG GAGACCACGG GTGTGACGGG GATTTTCGCA CCGGGAGTGG AGTTCACCTA CCGCGTGGTG ATCAGCGATA TCAACGCATC CGACAGCGCG CAGCCATGGC TGCTGCTGGG TGCCGCGGAG GACGTTCGCA TCGCTGGCGG CGATCTCGCG CAGGCGAATC ATCGACCGCT GGCGGTCGGC GGGTTCTCCG CGCTGCAAAT GATCGCAGGA TCAAACTCGC ACGGGGTCGG TCTGCCGGCG CAGCCGCTTC GCGCGCGCGT CGAACGAGAC GGCGACGACA TCACCGACGA GTTGACGCTG CGCTACTGA
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Protein sequence | MLFPQLVRLA VLTSILPALA FDGAAQPAPA YTFTTYVGRN NIGYVDGEGT QARFHEPAGL ACDADGNLYV VDPGTNLIRK ITPAASVSTF AGTPTGWGLV DGPAASARFG LPQGVAVGAD GTVYIADTGN AAIRIITPDG SVRILAGGRS GSQDGYGTGA TFNLPEAVAV NAAGVVYVAD SGNNTVRRIE EGNVTTLAGL AGASAGAVDG AGSDARFNGP KGIAVDANGT VYVADTSNHI IRKVTPSGVV TTLAGSPGIS GNSDGAGDAA RFNAPTDIAV DDAGTIYVVD QSGSLRKITP EGVVTSLASG FSYPRGVAFD RSSGVFFVAD TGHHVIKRVT PNGSVTVFAG ADVLVRSADG VGLNAQFTSP RGLTVAADGT VFVADSNAYV IRKVTPGLLV TTWAGSLVRP IYQTVDGQGS NAGFGNPTGI AVDAAGNLFV ADFKATIRKI DATGYVSTVA GAHGLDGSLD GEKTAARFNA PHGLAVDQHG NLYVADTFNH SIRKIDAAGQ VTTPYGVSGV EGTVDGIGNA ARFGSPTALA FDRDGSLFVA DGHRVRRISP EGVVTTVAGT ANATGSIDGV GAAATFGEIK GLAVDRAGNV FVAENTTHVI RRITPDGTVV TIGGLAGSIG TADGVGSAAR FNEPWGLALD RFGHLYIVDS GNNTIRKGVI VGATAPAITK DPVAKAAGAG RQASFTLTAT GLPAPQFQWQ RKRAGESDFV ALSEIAEFSG VETATLTVTT AAAMTGDQFR CVVENGIGPA VTSGTATLTV VPPPSFSSEA ETTFTVGAAG RFQVAAAGAT VLALKSGALP AWAHFDPATG ILSGTPTELA APLQLVFEAG NAAVTPTEQP FTLKISAGPL VVADPVAHTA NAGATAILSV DAAGVAPLSY RWTKDGVPVV NSTRISGADG PVLALGRTQL ADGGTYAVTV TGPDGTAVTS RAAVLSVAQP PTISTAPASA IVASGARANF TVAATSNSPL AFQWLYNGDP VAGENASMYA IAAVNPGWSG LYSVRVSDAA TAVETTPVIL GVPIDQKLWG WGSEAGADIV HPNGNLYDQV LLTSSTVALK ADPGQVTRVS FIDLSDDIVQ VEFSGAGTLH VQLKNAAAPA APLFYNQNVS YVKGHAGITI VGADETTHLS VFSVGRVTAV NQGLFRPEVN YDGMADIAFI AISSANGKFG GLYAGNAVCS ETTGVTGIFA PGVEFTYRVV ISDINASDSA QPWLLLGAAE DVRIAGGDLA QANHRPLAVG GFSALQMIAG SNSHGVGLPA QPLRARVERD GDDITDELTL RY
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