| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2852 |
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| Symbol | |
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| ID | 6208286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3641884 |
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| End bp | 3645900 |
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| Gene Length | 4017 bp |
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| Protein Length | 1338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692516 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001819733 |
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| Protein GI | 182414667 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.216357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0407933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCT CGCCGTCGTT TTCTGACCGG CCGGCCGTGC CGCCCGTGCG GCCCCTCTTC
GCTGGCGTGG CGCGGTTGAG CGTGGCGCTG TGCCTTGGTT TCTCCGGCGT GGGACTCCTC
GCGCAGCAGA TGGGCGCGCC GGCTCCGGGG CTGCTCGAAG TCGGTGCGCC TCTTTTCAAC
GTGCACACGT CGGTTTCCCT CGGCTTGGGC ACGCCGCCGA CGGACCTGCA TGTGCTGCCC
GATGGACGCA TCCTCGTCTT CGCGAACCAG CAGCTGGCAC TCGGCGACGG GACGCGTTGG
GAAGTATTCC CGCACGCCGA GGACGAGGCG CCGCTAACGG CCACCGGCGT GGCGGTGGAT
GCCAACGGCG ATCTTTACGT CGCCGCCCCG GAGGGCTTCG CGCAGATTCA GTTCGAGGAG
CGAGGCGGCT GGCGGGCCCA CGTCGTGCAG CCTTGGTCCG CTGACGATCG CCGCGACGGC
GCTACGCCGC GCAAGGCGAT CGAAGCCGGT CCGGCCTGGC TGTGGCACAG CGGCAGCGGT
CCGATTCTGG CGTGGCGGCC GGGCGAGTCC GCGCGCGCCA TCGGACGCGT CGATTCGATC
CAGCACGCGT TCTGGTTCCA AGGCACCAGC TACGTGAGCG ATCGCACCGG CGGAGCGCTC
TGGCGGATCG ACGCCGGAGG CATGCATCCC GTGTCCTACG CACCGGCGAT TTCCGCCAGC
GACACGATCA CGTGTGCGGT GCCGCTCGAA GAGGAAATGC TGGTGGGCAC CTACGGCCAT
GGGCTGCGCG TGTTCGATGG CCGGACCCTG CGGCCGTTTG GCGCGGCCGG GCCGATGGCC
GGTGACATTC AGGTGAACGA TCTCTGCGCG ACTGCCGGTG GCTTTTATGC GGCCGCAATC
GAAAACCTCG GCGTCGTGTT TTTCGATGCC AGCGGCCGCG TCGTGCAGGT CCTCGACCGC
AGCTACGACC GCCGGCTCGG CCGCGTCCTG CGCCTCGTCG CCGCGCCTGG CGGCGTGATC
TGGGGCTTGC TCAGCGACGG GGTACTGCAG GTGGAATTTC CGTCCCGGAT CTCCCACTTC
GAGCCGCTGA TCGGCTCCGG CCTCAATGTC GCGCAGCCCT TCCGCTTCGA GGGACGTCTC
TGGGTCCTCG CCGACGGCAC GGCCCGGCGT GCGATCTATG ATGATCACGG CCGAATGATC
GAACTGCGGC CAGATACGCC GGCGGGCCGT TTCGTTTCCA ATCCTTCCAC CGAAATGGGC
GTGCTGGTCG TCGCCACTGA CCGCGGCGCG TATTGCCGCC AGGCGGAGCA GTGGGTCGCG
TTCGCTCCGG AGGTGGACAA CCTGCGGCTG GTCGATCATC CGCCGGTGAA CGGTCGCTGG
CTCTACGGCG CCACCGGTCA GATCGGATGG ATCGCGCGCC GCGGCGACAC GTTCCAGCTT
GAGTCTTTTC CCGAGCCATC GCTCGAAAAG ATTTATGGTT CCGTGGCCGC CGACGATGGC
TCCGTCTGGC TGGAACTCGG CAACGGTCGG CTCGGCCGCA TGCGGCTGGT CGAGGGCCGG
CCCACGATTG AATACTTCGG CGCCGAACAC GGCGTGCCGA ACAATTGGGC CCAGGTGTTT
CGCTGGAAAC CGGGTGTGCG ATTCAACGTC GGCGATCGGA TCCTGCGGTT CGACGAGTCG
GCCCGCCGCT TCCTGCCGGA CACGGAATTT GCCCGCCATT TCCCGCGTGT CACCGACATC
GTGGGCCGGC CGGGACGCGA CAGCCGCGGC CGTTGGTGGA TCACCACGCG GGAGGGAGTG
CATGTGCTGG AGGAGCGCCC CGGCGGCTGG CGCGATCTGC GCGAGAAAAT GCCCGCAGGA
TTCCGCCCCT ACTACTTCAC GTTCCAGCCC GACGGCGTCG TGTGGATGCA CGCCGACGGC
CACCTGACGC GTTTCGATCC GGCCATGGCA ACTGCCCCCG AGGAGCCGTT GCGCGCACTG
ATCACCCGCA TCGAAACCCG CACTGGCCGG CGCACGCTGC TCAGCACGGC CGCGCTGGCG
ACACCGCTGC CGTATGCGGA CAATTCCCTC ACCGTGCATT TCTGCGCGCC GTCCAGCGCC
TTCAAGCCGG TGGAGTTCGA CGTGTGGCTC GAGGGTGGCC GCGCCGGTTG GATGCCGCTG
CGCAGCAGCG GCTCGATCGC CTTCAAGGAC CTGCGCGAGG GCCGCTATCG GCTGCATGTG
CGCCCGCAGA GCGGCTCCAC CCTGGGCACG GAAGCGACGG TGGAATTCGC CATCCGGCCT
CCCTGGTACC GCACCGTTGC CGCGTACGTC GCGTTCTGCG TCGTCGGCCT CGGGCTGATC
CTGGTCGGCG GCCAGCTGAC CTTTGCGCTG CAACGACGCA AGAACACGCA ACTCGAGCGG
CTCGTCGCCG AGCGCACCCG CGAGCTGCAC GCGAGCAACG AGCGGCTCGC CGCCCAGCTC
CAGCAAAACC AGATTCTCTC CAAAGCGATC GAGCAGAGCC CGGCCGCTAT TTTCATCGTC
GATCGGGAGG AGACGATCGT CTTCGCCAAT CCCCGCGCCT ACGAGATGAA CGGCCGTGCC
GACTCCACGC TCGTCGGCCA ACTGCTGCGG TCGGTGCGGA CGCCCACGAT AACGCCCGAG
CTCGTCCAGC AGATCACCGC CACGGTGCAG CGCGGCGAGA CGTGGCGCGG CCAGTTGACC
AACCGCCGAC CCGAAGGACG CGACTTCCAG GTGCGCTGCT TGATCGCCCC CATCCGCCAG
GCGGGGGGCG ACGCCCACCA CTACCTGGTG CTCGAAGAGG ACATCACGGA ATCGCTGAAT
GAGCAGGAGC GCCGGCGCCG GCTCGAGGCG CAGCTCATCC AGGCGCAGAA GCTCGAAAGC
ATCGGCACGC TCGCGGGCGG GATCGCGCAT GATTTCAACA ACATCCTCAC CGCGATCCTC
GGCTATTGTG AGCTCGCCAG CCAGGACGCT CCCGACAACC CGGCGCTCCA GGGCGATCTC
GCCGGCATCC GCTCGGCGGG TACGCGCGCC AAGGAATTGG TCGCACGCAT CCTCACGTTC
TCGCGGCAAA CGCACGTGCA ACTGGTGCCG CTCGACCTCG CCCAGCCCGT CGCCGAGGCA
GTGAAGCTCA TCCGCGCTTC AGCCCCTTCG ACCGTCGAGA TCGTGACCAC GCTGCAGAGC
GGCACCATCC GCGCCGACGC GACGCAGATC CAGCAGGTCG TCCTGAACCT CTGCACCAAT
GCGCTGCAAG CTTTGCCCAA TGAGCGCGGC CGCCTCGAGA TCACCGTGCA GTCCGTGCAA
GTCTCCCGTG AAATCGCGGC GGAGGTCGAC TCATTGTGGA TCGGCGAAGC GATGCGGCTG
GTCGTCAGCG ATGACGGCAG CGGCATGGAC GCCTCCACGC TGGGTCGGAT CTTCGATCCT
TTCTTCACCA CCAAGCCGCA GGGCGAAGGC ACCGGTCTGG GGCTGTCGAT CGTGCAGGGC
GTCGTCACCG GACACCAGGG CGCGATTCGC GTGCGCAGCA GCCCGGGGCT CGGCACCTCG
TTCGAGATCT ATTTTCCTCC GTCGAGTGAA ACCAGCAGCC CGCCCGCGCC GAATTCTCCC
GTACCGCGCG GAGCGCAACA GGAGATCATC GTCGTCGATG ACGAGCGCTC CGTCGCAAAT
TTCGTCGCCA CGCGGCTGCA CCAGCTCGGT TACCGGCCGA TGATGTTCTG CGATCCGCAG
GCCGCCCTGA ATGCCTTCGC CTCGCAGCCG ACGCGCTTCC AGGCGATCGT GACGGACCTG
ACGATGCCGC GGCTCACCGG CGCCGATCTC ATCCGGCAAA TCCGCAGCCG CGGCTGGCTG
ATTCCCGCCG TCATCATCAC CGGCTACCGC GGCGACGCGG TGCGCGCCAA CGTCAAGGCA
CTGCCGCGGT GCGTCGTGCT GCCCAAGCCG TTCAGCGGTG ACGATCTCGC GCGAGCGCTG
CACGCCGTGA TCAGCGACTA CGCGGTGGGC GCTGCGGGTC TGACGCGGTC GAACTGA
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| Protein sequence | MRFSPSFSDR PAVPPVRPLF AGVARLSVAL CLGFSGVGLL AQQMGAPAPG LLEVGAPLFN
VHTSVSLGLG TPPTDLHVLP DGRILVFANQ QLALGDGTRW EVFPHAEDEA PLTATGVAVD
ANGDLYVAAP EGFAQIQFEE RGGWRAHVVQ PWSADDRRDG ATPRKAIEAG PAWLWHSGSG
PILAWRPGES ARAIGRVDSI QHAFWFQGTS YVSDRTGGAL WRIDAGGMHP VSYAPAISAS
DTITCAVPLE EEMLVGTYGH GLRVFDGRTL RPFGAAGPMA GDIQVNDLCA TAGGFYAAAI
ENLGVVFFDA SGRVVQVLDR SYDRRLGRVL RLVAAPGGVI WGLLSDGVLQ VEFPSRISHF
EPLIGSGLNV AQPFRFEGRL WVLADGTARR AIYDDHGRMI ELRPDTPAGR FVSNPSTEMG
VLVVATDRGA YCRQAEQWVA FAPEVDNLRL VDHPPVNGRW LYGATGQIGW IARRGDTFQL
ESFPEPSLEK IYGSVAADDG SVWLELGNGR LGRMRLVEGR PTIEYFGAEH GVPNNWAQVF
RWKPGVRFNV GDRILRFDES ARRFLPDTEF ARHFPRVTDI VGRPGRDSRG RWWITTREGV
HVLEERPGGW RDLREKMPAG FRPYYFTFQP DGVVWMHADG HLTRFDPAMA TAPEEPLRAL
ITRIETRTGR RTLLSTAALA TPLPYADNSL TVHFCAPSSA FKPVEFDVWL EGGRAGWMPL
RSSGSIAFKD LREGRYRLHV RPQSGSTLGT EATVEFAIRP PWYRTVAAYV AFCVVGLGLI
LVGGQLTFAL QRRKNTQLER LVAERTRELH ASNERLAAQL QQNQILSKAI EQSPAAIFIV
DREETIVFAN PRAYEMNGRA DSTLVGQLLR SVRTPTITPE LVQQITATVQ RGETWRGQLT
NRRPEGRDFQ VRCLIAPIRQ AGGDAHHYLV LEEDITESLN EQERRRRLEA QLIQAQKLES
IGTLAGGIAH DFNNILTAIL GYCELASQDA PDNPALQGDL AGIRSAGTRA KELVARILTF
SRQTHVQLVP LDLAQPVAEA VKLIRASAPS TVEIVTTLQS GTIRADATQI QQVVLNLCTN
ALQALPNERG RLEITVQSVQ VSREIAAEVD SLWIGEAMRL VVSDDGSGMD ASTLGRIFDP
FFTTKPQGEG TGLGLSIVQG VVTGHQGAIR VRSSPGLGTS FEIYFPPSSE TSSPPAPNSP
VPRGAQQEII VVDDERSVAN FVATRLHQLG YRPMMFCDPQ AALNAFASQP TRFQAIVTDL
TMPRLTGADL IRQIRSRGWL IPAVIITGYR GDAVRANVKA LPRCVVLPKP FSGDDLARAL
HAVISDYAVG AAGLTRSN
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