| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2849 |
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| Symbol | |
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| ID | 6204388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3635631 |
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| End bp | 3637313 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641692513 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001819730 |
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| Protein GI | 182414664 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00996397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0311908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGT CCCGCCTGCT CGCATTGGAT CTTGATGCCA GTCGTTTGAC CTGCGCGCTG
TTCGCGAGCG ACGCGCAGCG CCGGCTGCAC TTGGAGGAAC TTGGCAGCGA ACCCGTGCAT
GGCGAGCTGG CGTCGGAACC GGCCGGCGCG CAGGACCTGG CTCGTGCCGT CCGCGCGCTC
GCGGCGCGCG TGCGCCACCG CGGAGAAGTG CGCATCGCGC TCCCCGGCGC GCTGGCGTTC
ACCAAATGCG TGCGCACGCC GGCCATCACC GGGGCGAAGC GGCGGCGCGT CGTGGAGTTC
GAGGCGACGC AAAATATCCC CCATGCGCTC GATGAGGTTT GGTGGGATCA CTGGGTGATT
GCACCGGACG CGGCGGATCT GGAGATCCTG TTGATGGCGG CGAAGCGCAG CGCGATCTCG
GCGCTTTGCG CGGCCCTCGA CGTGCCGGGG TGGCGGCTGG AGCGGGCGAT GCCGGCTGCG
GCTGCGCTGC ACGGCACCGT GCGCTGGAAC TATCCCGACG TATCCGCACC GGTGTTGTTG
ATAAACCTCG GGGCGCGCTC CACGCATCTG ATCGTGTCGG GCGAAAAACG GCTGTGGCTG
CGCACGATCG GGTTCGGCGA AACCTCGATC TCGCCCACCG TCGCGATGCC GCCGACCGCG
GACAGCGCGC GAGGAGCCAG GCTGACGCCG CCGGTTGCTT CTGATTGGCC GGCGGCGTCG
CTCGCAGTCA TCGAGCGCAG CGTGGCCGAG AGCGGAGCGG GGCAGTTTCG CAGCCGGCTG
CAGCTCGAAA TCGCGCGAAC GCTTGCGGGC TTCGCCGAGC ATCGATCCGG CGAGAGTGTT
GACCGTTTTT ATCTCACCGG CGGTGGAGCC GGGCTGCCGA TGCTGGCGGA TTTCTTGCGC
GAACAGTTCG GCGTTCCGGT CGAGCGCTTC GATCCGTTGC GGCGCATGAG TCCCGGCGCA
GCGGTGACGG GGATGCCGGA GTCGGCGGCC GGATTGGCGG TCGCGGTGGG GCTCGCGGCG
GACCTCGTCG CGCCGGCGAC GGTCGTGGGC AACCTCCTGC CGCCGGAACT GCGGCGACGG
ACAGAGCGCC GGCATCGGCA GGTCGTGTGG CTGGCGGCTG CGGCGCTCTT GCTGGCCGCG
CTGCTGTCGT CGGCGTGGCA CTTCCACCGC GTGACGATTG CAGCCGAAGC GGCGCTGCGC
GAGCGGCAGG CCCAACTGCA CGTTGGGCGC GGCCTCGCGC AGCAAAACGC GATGAAAAGC
GCGCGCCTCG CGCAGGCTCG CGAGGAACTC AGGGCGATCC AGACGCTCGC GGAGCGACGC
GGCTATTGGG TGGCATTCCT CGACGATTTG CAGTCGAGGC TCGGCGAGGT GGAAGACGTG
TGGCTCGATG AGCTCACCGT GCTGGAACCC GAGCCGGAAG GCAGCGGCAG TGGCCGGGAG
GCTGGTTCAG CCGACGGCGA ATTGAAGCTC GTGGTGAGTG GGCGCTTGCT CGATGCCAGC
CATCCTGCGG CGCCACCGGG TCAGGAAAGT CACGCACGCG CGCAGAAGCT GCTCGCGAGT
CTGGCGGCCT CGCCATTCGT GAGCGCGATC GGCGAAGAGC GGTTCGACGA CCGCCAGCCG
GCCATCCTGC GGTTCAGCTG TCAGCTCACG ACGAAACGAC CGCGTTCAGC GCCGCTGCCA
TGA
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| Protein sequence | MRSSRLLALD LDASRLTCAL FASDAQRRLH LEELGSEPVH GELASEPAGA QDLARAVRAL
AARVRHRGEV RIALPGALAF TKCVRTPAIT GAKRRRVVEF EATQNIPHAL DEVWWDHWVI
APDAADLEIL LMAAKRSAIS ALCAALDVPG WRLERAMPAA AALHGTVRWN YPDVSAPVLL
INLGARSTHL IVSGEKRLWL RTIGFGETSI SPTVAMPPTA DSARGARLTP PVASDWPAAS
LAVIERSVAE SGAGQFRSRL QLEIARTLAG FAEHRSGESV DRFYLTGGGA GLPMLADFLR
EQFGVPVERF DPLRRMSPGA AVTGMPESAA GLAVAVGLAA DLVAPATVVG NLLPPELRRR
TERRHRQVVW LAAAALLLAA LLSSAWHFHR VTIAAEAALR ERQAQLHVGR GLAQQNAMKS
ARLAQAREEL RAIQTLAERR GYWVAFLDDL QSRLGEVEDV WLDELTVLEP EPEGSGSGRE
AGSADGELKL VVSGRLLDAS HPAAPPGQES HARAQKLLAS LAASPFVSAI GEERFDDRQP
AILRFSCQLT TKRPRSAPLP
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