| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2836 |
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| Symbol | |
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| ID | 6207438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3622107 |
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| End bp | 3623450 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692500 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001819717 |
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| Protein GI | 182414651 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.533211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000777787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGAAT CGCTCACCGA GAAACTGGGC CAAGCCCTGC GCAACCTTCG CGGCGTCGGC
ACCCTGTCCG AGGAAAACAT GGCGGAAGCG CTCAAGGAAG TGCGCTCCGC CCTCCTCTCC
GCCGACGTCC ATTTCAAGGT CGCGCGCGAG TTCGTCGAAC GCGTCCAGCA GCAGGCCGTC
GGCCAGCAGG TCACCAAAGG CATCGCGCCC GGCCAGCAGG TCATCAAGAT CATCCACGAC
GAACTGGTCC GCTTGCTCGG CGAAGGTACC ACGGCGCTCT CCGGCGAGCG GCCGCTGAAG
GTGCTGATGG TGGGTCTCCA CGGCTCGGGC AAAACGACGT CCACGGCGAA ATTGGGCAAG
CTGCTCAAGA AGCGCGGGTA TCGGCCATTC GTCGTCGCGT GCGACGTGTA TCGCCCCGCC
GCCATCGACC AGCTCGAGAT TCTCGCGAAG CAGGAGGAGC TCGGTTTCTA CGCGGATCGC
GTCTCGAAGG ACGTGCCCGC GATCGGCAGC GCGGCGCTCG CGGAGGCCCA GGCGGCGACG
GCTGATTGCA TCATTTTCGA CACCGCCGGC CGGTTGCAGA TCGACCAGGA TCTCATCGAG
GAAGTGAAGC GGCTCCGGGC GCGCGTACAG CCCGACGAAG TGCTGCTGGT GGCGGACGGC
GCGCTCGGTC AGGAAGCGGT CAACGTCGCG AAGGCGTTTC ACGATGCGCT GCAGCTCACC
GGACTGGTCC TCACGAAGAT GGACGGCGAT GCGCGCGGGG GCGCGGCGCT GTCGATCAAG
ACGATCACCG GCGTGCCGAT CAAATTCGTC GGCACGGGTG AAAAAACGGC GGACTTCGAA
CCGTTTCATC CCGACCGGCT GGCTTCGCGG ATCCTTGGCA TGGGCGACGT CGTGTCGCTC
GTTGAAAAAG CGCAGGAGAC GATCGACCAG AAGGACGCCG AGAAGATGGC GGAGAAGCTC
CGCAAGGCGG ACTTCAATTT GGAGGACTTC CTCGCGCAGA TGCAGCAGGT GAAAAAGATG
GGCTCGATGC AGAGCATCGT GGGGATGCTG CCCGGCATGA GCGGCATGCA GCTGCCCGAA
GGCGCGGACA AGCAGATGGC CCGCACCGAA GCGATCATCA AGTCCATGAC CTTTCAGGAA
CGGCGGAAGC CCGAGATCCT CAATGGCAGT CGCCGCAAGC GGATCGCCGA CGGCTCGGGC
ACGAAGATCG TCGAGGTCAA CCAGCTCCTG AAACAGTTCT CCGAAATGCA GAAGATGATG
CGCATGTTCA AAGGCGGCGG CGGCAAGAAG ATGATGCGCC AGCTCGAGGC CATGCGCGGC
AAGGGCGGCA TGCCGGGCTT CTGA
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| Protein sequence | MFESLTEKLG QALRNLRGVG TLSEENMAEA LKEVRSALLS ADVHFKVARE FVERVQQQAV
GQQVTKGIAP GQQVIKIIHD ELVRLLGEGT TALSGERPLK VLMVGLHGSG KTTSTAKLGK
LLKKRGYRPF VVACDVYRPA AIDQLEILAK QEELGFYADR VSKDVPAIGS AALAEAQAAT
ADCIIFDTAG RLQIDQDLIE EVKRLRARVQ PDEVLLVADG ALGQEAVNVA KAFHDALQLT
GLVLTKMDGD ARGGAALSIK TITGVPIKFV GTGEKTADFE PFHPDRLASR ILGMGDVVSL
VEKAQETIDQ KDAEKMAEKL RKADFNLEDF LAQMQQVKKM GSMQSIVGML PGMSGMQLPE
GADKQMARTE AIIKSMTFQE RRKPEILNGS RRKRIADGSG TKIVEVNQLL KQFSEMQKMM
RMFKGGGGKK MMRQLEAMRG KGGMPGF
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