Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2827 |
Symbol | |
ID | 6204612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3609065 |
End bp | 3609802 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641692491 |
Product | LamB/YcsF family protein |
Protein accession | YP_001819708 |
Protein GI | 182414642 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.262303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00875882 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGAGCC TCGATCTGAA TTGCGACTTG GGGGAGGGCG GGGCGCACGA TGCGGAATTG ATGCCGTTGA TCAGCTCGGC GAACATCGCG TGCGGCGCGC ATGCGGGCGA CGCGCAGACG ATGCAAGCGG CGGTCGCCCT GGCGCAGCGG CACGGCGTCG CGATCGGCGC GCATCCGGGT TTTGCGGATC GCGAATATTT TGGCCGGCGC GAGTTGGAGC TGCCGCCGAG CGGAATCGAG CGGCTCGTCG GGGAGCAGGT GAACGCCTTG CGCGCGCTTG CACCGCTGCG GCACGTGAAG CCGCACGGCG GACTCTACAA CCGGGCGGCG TGCGATCGCG CGTGCGCGGA AGCTGTCGCT CGCGCGGTGC GGGCGGTGGA TCCAGCGCTC GTGCTTTATG CGCTGGCGGG CAGCGAACTG GTGCGCGCCG GCCGCGCGGC GGGTTTGCGG GTGGCGGAAG AGGTGTTTGC CGATCGCACG TATCGCGCCG ACGGCTCGCT CACGCCGCGT TCGGAGCCGG GGGCGCTGAT CGAAAGTGAG GACGCCATGG TCGTGCAGGT GCTGCAGGTC GTGCGCGAGG GGATCGTGAG ATCGATCGAC GGCGTGGACG TGAAGATCGT GGCGGACACG GTGTGCCTGC ACGGTGACGG CTCGCAGGTG GTGGCGTTTG CGCGCAGACT GCGCACCGCG CTTGAGAGCG CGGGCATCGA GATCGCGGCG ATGGCTGCGG CTCGGTAG
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Protein sequence | MTSLDLNCDL GEGGAHDAEL MPLISSANIA CGAHAGDAQT MQAAVALAQR HGVAIGAHPG FADREYFGRR ELELPPSGIE RLVGEQVNAL RALAPLRHVK PHGGLYNRAA CDRACAEAVA RAVRAVDPAL VLYALAGSEL VRAGRAAGLR VAEEVFADRT YRADGSLTPR SEPGALIESE DAMVVQVLQV VREGIVRSID GVDVKIVADT VCLHGDGSQV VAFARRLRTA LESAGIEIAA MAAAR
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