| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2826 |
|---|
| Symbol | |
|---|
| ID | 6204519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3608112 |
|---|
| End bp | 3609068 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641692490 |
|---|
| Product | urea amidolyase related protein |
|---|
| Protein accession | YP_001819707 |
|---|
| Protein GI | 182414641 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
|---|
| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.196428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00928055 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA GGATCATTCG CGCCGGCCAG TTGACGACAG TGCAGGATCT GGGACGGTGC
GGACTGCGCG CGGCCGGGGT GCCGTTGAGT GGGGCGATGG ATCCCTTCGC GCTGCGCATC
GCCAACGCCC TGGTGGGTAA TTCCGAGTTG GCGGCGGCGC TGGAATTCAC CCTGGTCGGA
CCGGAAATCG AGTTCACGGC CGAGGCACGC GTCGCGCTCA CCGGAGTCGA GTGCGACGGC
TTCGCCGCGT GGAAGCCGGT CGTCGTTCCA GCCGGTGCGC GGGTTAATCT CAGCCGGTGT
GTGCGCGGGT GCCACGGTTA TCTGGCGATC GCCGGGGGTG TGGAGGTGCC GCTCGTGTTG
CGGAGTCGCA GCACGTATTT GCGCGGCGGG TTCGGCGGAT GGCAGGGGCG GGCGTTGCGC
GACGGCGACG TGCTGCCGAT CGGCGCCGCG GCGGCAATCG AGGGTACCGC GCTCGCAGGT
GTGACGGGCT GGCGGATCGA TCCGCGAATC CTGCCGGCGT ATTCCGCGAA GGCGACAGTG
CGGACGTTGC CGGGCGCGCA AGGGGAGGAG TTTGGCGGCG CGTTGTTCGA GCGGGAGTTC
ACGGTTGCGC CGCAATCGGA TCGGATGGGG CTGCGACTGC TCGGACCCAA ACTGGAGCGC
AGCAACACTG CGGACCTGCT CTCGATGGCG GCGGCGCCGG GCACGATCCA AGTGCCACCG
GATGGCCAGC CGCTCGCGCT CATGGCGGAC GCCCAGACGA TCGGGGGCTA TCCACAGGTT
GCGCACGTGA TCAGCGTCGA TCTGCCGGTG CTGGCACAGC TGCGGCCCGG TGACACGGTG
CGGTTCGCGC CGGTGACGCT CGCCGAGGCG CACCGGCTCG CGCAGGCGCG GGAGCACGCC
GTGGCGATGC TGCGCGAGGG GCTCGCCGAG AAACTGGGCG CGCACCCGCA GCCGTGA
|
|---|
| Protein sequence | MEMRIIRAGQ LTTVQDLGRC GLRAAGVPLS GAMDPFALRI ANALVGNSEL AAALEFTLVG
PEIEFTAEAR VALTGVECDG FAAWKPVVVP AGARVNLSRC VRGCHGYLAI AGGVEVPLVL
RSRSTYLRGG FGGWQGRALR DGDVLPIGAA AAIEGTALAG VTGWRIDPRI LPAYSAKATV
RTLPGAQGEE FGGALFEREF TVAPQSDRMG LRLLGPKLER SNTADLLSMA AAPGTIQVPP
DGQPLALMAD AQTIGGYPQV AHVISVDLPV LAQLRPGDTV RFAPVTLAEA HRLAQAREHA
VAMLREGLAE KLGAHPQP
|
|---|
| |