| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2823 |
|---|
| Symbol | |
|---|
| ID | 6205201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3605125 |
|---|
| End bp | 3605778 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819704 |
|---|
| Protein GI | 182414638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.779716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00827061 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTT CCCTCGTCCC TACGCTGGTC CTGGCCCTGC TCGGACTAGC AGCCTGCCGC
GACGCCAAGA TCGAAACCTA CCGTGTCGCG AGCGAGAAGC CCGAACCGCT CCCACCGATC
CTCACGGGCG GACTGGATAC TCCGCCCGCG GCTGGCGCGC CGAATCCGAT GAGCGGAGGC
GCGATGGCCA ATACGGCCGT GTCCACCGCC AACACCGGCC CTGCGCTGAC GTGGACGGCT
CCGGAGCACT GGCAGGCGAA GCCCGCTTCC GCCATGCGCA AGGGCAGCTA CGCCGTACCC
GGCGAAGGCG GCGCGCCAGC CGATTTCTCG GTCACCGCTT TCCCGGGCGA CGTCGGCGGC
GAGGTGGCCA ACTTCAACCG TTGGCGCGGC CAGATTGGAC TGTCGCCGCT GCCGGCGTCC
GATTACGAGA ATGCCGTGAC GCGCTTCGAG CATGACGGAC TGCGGTTCGC GGTCGTCGAA
TTCGCCAACC CCGATTCCCA ACCCGCGCAG CGGATGATCG GCGCGATCGT GCCGGTCGGC
CAAGCCACCT GGTTTTTCAA ACTCGCCGGC CCCGACGCAC TTGTCGCCAA GGAAAAGCCC
GCGCTGCTCG ATCTGCTTCG CTCGGTCAAA GTTTCCGCCC CCGCCCAGCC ATGA
|
|---|
| Protein sequence | MRVSLVPTLV LALLGLAACR DAKIETYRVA SEKPEPLPPI LTGGLDTPPA AGAPNPMSGG
AMANTAVSTA NTGPALTWTA PEHWQAKPAS AMRKGSYAVP GEGGAPADFS VTAFPGDVGG
EVANFNRWRG QIGLSPLPAS DYENAVTRFE HDGLRFAVVE FANPDSQPAQ RMIGAIVPVG
QATWFFKLAG PDALVAKEKP ALLDLLRSVK VSAPAQP
|
|---|
| |