| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2789 |
|---|
| Symbol | |
|---|
| ID | 6205130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3563290 |
|---|
| End bp | 3564264 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692451 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819670 |
|---|
| Protein GI | 182414604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.209775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCT TTGTTATTGG ATCTGTGCTC GTCCTAGTCT TCGCGGTCGT CGGTGTGGGC
TGGCGCGAAT CGAGTCGGGC GCGTGAAACG CGGGCTGCTG TGACTGCCCG CCAACGCGAC
AACCTTCGGA TCTCAGCGGC CATCGCTGCA GCCGAGCAGA GGCGGGCGGC CGCCGAAAGC
GAAGCGGCTG CACAGCAGAA CCGGCGGGAG GCGCTCGAAC ACGCGAATGC TCCGAAACCG
CCGACTGAGC CAAAGCCCGG AAGCTTCGAT CCGGTGGTCC ACTATCGAAA GATGCGGGAG
CGTGAACGGG ATCCGAAGGT GCAAGCGGTG CGCTTGGCCG CGCTTCAGGC TGGCGATAGG
GTGAACTACG GGACGCTGTT TCGCCGGCTC GGATTGAGTC CGGAACAGAT CGATAAGTTC
AGCCGGATCA TGCTGCGGCG GCGCGAACAG GTGTGGGACC TCCATGATGT GCTCGACGAG
GCCGCGGCTC AGGGGCCGGT CGCGAAGGAA ACCCAAGCGG CGGTCGCGAA GCTGCGAGCT
GAGGCCAAAG CGGAGTGTGA GTCCGCGCAA CGGGAATTAC TGGGCGAATT GGGCTATCGG
GAACTGCGCG AATACGAACG CTCGCTGCCG GCGCGGACGA CCGTCAGCGA TATCGCCGGC
GCTGCGGTGC TTGCGGGGAG TCCATTCTCC GTGCAGCAGG CCGAGCAACT GACCGCGATC
GTCGCCAACG CGAGCAGCGA CTATCGCGAG GGCCGAGTGG CCAGTGACCG AACGATTGAC
TGGACGGCGG CCGATGCGCA GGCGAGAGGC GTGCTGTCGG CTGAGCAATG GGAGTTCTTT
CGGGCGGTCG ATCCGCCGAC GTCGCCTGGC GGTCGGTTTC GCGGCGGTCA CGCGCAGCAG
TTGATGGAGC GGATTGCCCG TGCGGAGGAA GAACGCGAGA AGAGCGGGAC CACCGTGGTC
GCACCAGGCG GATGA
|
|---|
| Protein sequence | MKAFVIGSVL VLVFAVVGVG WRESSRARET RAAVTARQRD NLRISAAIAA AEQRRAAAES
EAAAQQNRRE ALEHANAPKP PTEPKPGSFD PVVHYRKMRE RERDPKVQAV RLAALQAGDR
VNYGTLFRRL GLSPEQIDKF SRIMLRRREQ VWDLHDVLDE AAAQGPVAKE TQAAVAKLRA
EAKAECESAQ RELLGELGYR ELREYERSLP ARTTVSDIAG AAVLAGSPFS VQQAEQLTAI
VANASSDYRE GRVASDRTID WTAADAQARG VLSAEQWEFF RAVDPPTSPG GRFRGGHAQQ
LMERIARAEE EREKSGTTVV APGG
|
|---|
| |