| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2765 |
|---|
| Symbol | |
|---|
| ID | 6205511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3537918 |
|---|
| End bp | 3539798 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692426 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001819646 |
|---|
| Protein GI | 182414580 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.411575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCCA GTATCATCAT CGCCACGCAC AACCCGCGGA CCGACTACTT GGAGCGCGTC
ATCGCGGCCA TCCGCAGGCA AACGCTGCCC CCCGGCGAAT GGGAATTCCT GCTGGTGGAC
AACTGCAGCT CGCCACCGCT GGCCAGCGAC CTCACCAACT GGCACCCGCA CGGCCGGATC
ATTGCCGCGC CTATGCTCGG GCTGACTCCT GCGCGGTGTG CCGGGCTAGC CGCTTCGCGC
GGCGAAATCC TCATTTGGGC GGACGATGAC AACGTCCTCG CGCCGGACTA CCTCGAGCAG
GCGCTGACGG CATTTGCCGC GGACGCAAAG CTCGGGGCGG CCGGCGGCAA ATCCATTCCC
GAATATGAGA GCGCTCTGCC TCGATGGTAT CACTCGGGAC TCGCTCCACT GGGCTGCCGT
GACCTGGGCG ACGAGCGGAT TGACAGCCGC TGGACCACCA TGGAACCGAG ATTTTATCCG
TCGTCCGCGC CGCTAGGCGC AGGGTTGGTC ATTCGCCGTT CGGCGATGCT GGCATGGGCT
GTGGCGGTGG AGCACGATTC GCGACGGGCC CGATTCGGTC GCCACGGCGC GCAGCTTACG
TCCGGCGAAG ACAACGACAT TAACCTGACC TTGCTCGCGG CGGGATGGAA GCTGAGTTAC
CTCCCCGCAC TCCGCCTGAT CCACCTCATT CCTCCACGCC GGCTCACGGC TGAGTACCAA
GGGCGCATCG GGGAGTCGAC GTCTCGCGAC TTCGTGCGAG TACTTGATGT GCACGGCATC
AGACCCTGGA GACCGATTCC GCGCTGGGGC GTACCGCTGC GGAAAGCCCG CGCCTGGTTC
AATCGCCGCG CGTGGCGCGG GCCGGCGGAG CACATCCTCT GGCGCGGAGA CTGCGGTCAG
TTCGATGGCC GCGCGTCGAT CTGGAACTTG CAGAGGGCTC GTATGCTAAA AGCCGTGGGA
GCGGGTCGCG CCGTTTATCT GCTCTACCAT CAGCCGATGG GATGGGTGCG CGGTTCCTGG
CGCGACGGCG GCCCGCTGGG AAGACGTCGC ACCGAGCGAG GCCGACGCGC CATGATGTCT
GCCGCCAGCA CGCTTCCTCC GCCGTCTGCG ACCGGAAGCT CGCCCATCGA TGTCACCCTT
CTTACCGGCC GACAATTCTG GTACCAGACC GCGTTTTGCC TGTGGACCCT CGCCCGTACC
GCCGAACGGC CGGTGCGCCC GCTGATCATC GATGACGGTA CCACTGATGA GACGGCCATC
GCGTCGCTGC GACGCACGTT CCCGCAAGCG CGGTTCATTC CTCTCGCCGA AACCATGGCC
CGACTCGACG AGGTGCTGCC GGTAAAACGT TTTCCCGCCC TGCGTGCTCG ACGGGAGAAT
TTTGTGCTCC TGCGCAAACT GACGGACGTG CATGCCGGAC TCCATGGTTG GCGCTTGCTG
CTCGATTCAG ATCTCTTGTT CTTCCGCCGG CCGGACGTTC TGCTCGACTG GCTGGATCGA
CCGGAACGAC CGCTGCGCGG CGAGGACGTC ATGAATGCCT ATGGGTATCC GCTCGAGGAG
TTGGCTTGTC TGGCCGGCCG GACTCTTCCC GAAAGAGTTA ACACCGGAAC GCTCGGACTT
CGTAGCGACA CGATCGATTG GGAACGCTTG GAACACTGGT GCGACGCGCT GCAACGCCGC
GGACCGCATT ACTTCCAGGA GCAGGCGCTC ACTGCCATGC TCCTAGCGGG TGCGGATTGC
GTTGTGCTGC CGCCCGAAGA CTACGTGGTC TTTCCGCATC CACCTGAAGT CATGGAATGC
CGCGCGGTGA TGCACCACTA CACCGCCGGA TCAAAGCGCT GGTACTTCCG CCACAATTGG
CAACGCGTGT TTGGTTCATG A
|
|---|
| Protein sequence | MKASIIIATH NPRTDYLERV IAAIRRQTLP PGEWEFLLVD NCSSPPLASD LTNWHPHGRI
IAAPMLGLTP ARCAGLAASR GEILIWADDD NVLAPDYLEQ ALTAFAADAK LGAAGGKSIP
EYESALPRWY HSGLAPLGCR DLGDERIDSR WTTMEPRFYP SSAPLGAGLV IRRSAMLAWA
VAVEHDSRRA RFGRHGAQLT SGEDNDINLT LLAAGWKLSY LPALRLIHLI PPRRLTAEYQ
GRIGESTSRD FVRVLDVHGI RPWRPIPRWG VPLRKARAWF NRRAWRGPAE HILWRGDCGQ
FDGRASIWNL QRARMLKAVG AGRAVYLLYH QPMGWVRGSW RDGGPLGRRR TERGRRAMMS
AASTLPPPSA TGSSPIDVTL LTGRQFWYQT AFCLWTLART AERPVRPLII DDGTTDETAI
ASLRRTFPQA RFIPLAETMA RLDEVLPVKR FPALRARREN FVLLRKLTDV HAGLHGWRLL
LDSDLLFFRR PDVLLDWLDR PERPLRGEDV MNAYGYPLEE LACLAGRTLP ERVNTGTLGL
RSDTIDWERL EHWCDALQRR GPHYFQEQAL TAMLLAGADC VVLPPEDYVV FPHPPEVMEC
RAVMHHYTAG SKRWYFRHNW QRVFGS
|
|---|
| |