| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2682 |
|---|
| Symbol | |
|---|
| ID | 6207678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3434372 |
|---|
| End bp | 3435235 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692342 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_001819563 |
|---|
| Protein GI | 182414497 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAACCC GGTTCATCGT CAATCGCCGT TCAGGTCGCG CGAATCGCGT GCTCGCCGGC
GTGCGCGCGT TCGCCGCGCA GCTGGGAGCC GCCGTGGTGC TGACGGAGCG ACCACGGCAC
GCGCGTGACC TCGCTACCAC CGCACTCGAC GATGGCTGCG AGCTCATCGT CGCGGTGGGT
GGCGATGGCA CGATGAACGA GGTCGGCTCC GCCTTGATCG GCACCCCAGC CACGCTCGGG
CTGATTCCCT GCGGCTCCGG CGATGGGCTG GGACGTTTCC TCGGGCTGCA TGGCTCGCTC
TCACATTCGC TCGAAATCCT TTGCTCGGGG CGGCCGCGAC CGATCGACAC GGGCGTCGCG
GACGGCCACC CGTTTATCAA CCTCGCCGGA CTTGGCTTCG AAGCCGAACT CGGCGCACGC
TTCAACCGCC TCGAACGCCG CGGTTTTCTG CGCTACCTGA GCACCGGCGC GCGCACATTG
CACGCATGCC ACTCGCAGCG GTGCACCATC ACCGCTGACG ATGCGCAGGT AAACGTCGAC
GCGTTCACCC TCGCCGTGGC GAACAGCGCG CAATACGGCA ACAACGCCCT GATCGCGCCG
CACGCCCGCG TGGACGACGG CCAACTCGAC CTTTGCGCGC TACCAGCTGC CACTTGGTTC
AACGTTCTCC CGCTGACGCT CCGGCTGTTC TCGGGGACGA TCGATCGGGC CAGCGGCGTC
GTGCATCGCC GCGGAACCCG GTTCGTGGTC GAACGCCCAG CGCCCGGACC CCTTCACACC
GACGGCGAAA TTCACGAGGC GGGCCGGACC GTCGAGTTCG CGATCCGTCC CGCCAGCCTC
CGGATCATGT GTCCGGTGCC GTAG
|
|---|
| Protein sequence | MRTRFIVNRR SGRANRVLAG VRAFAAQLGA AVVLTERPRH ARDLATTALD DGCELIVAVG
GDGTMNEVGS ALIGTPATLG LIPCGSGDGL GRFLGLHGSL SHSLEILCSG RPRPIDTGVA
DGHPFINLAG LGFEAELGAR FNRLERRGFL RYLSTGARTL HACHSQRCTI TADDAQVNVD
AFTLAVANSA QYGNNALIAP HARVDDGQLD LCALPAATWF NVLPLTLRLF SGTIDRASGV
VHRRGTRFVV ERPAPGPLHT DGEIHEAGRT VEFAIRPASL RIMCPVP
|
|---|
| |