| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2650 |
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| Symbol | |
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| ID | 6208032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3396786 |
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| End bp | 3398282 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692310 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001819531 |
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| Protein GI | 182414465 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC CCTCCTTCAG CCACGACCTT CGCCAGCGCC AGACCCAATC GCTCGTTCTG
GCGCCACAGC TGCGTCAGTC CTTGAAGATC CTTCAGGTCG CCGCGCTGGA TCTGCGCTCG
GTCATTCAGG AGGAGTTGCA GGCGAACCCG ACCCTCGAGG AACTGCCGAT GGAGGGCGAG
AGCGTTGAGA AACCGGCCGA GACGGATGCG CCGAATGACA CCAGCACGCC CGGCGAACAC
GAGGACGTCG CCCCGCCCGG GGACGACAGC CCCACGCGCG ACGAGCTCGA TTTCACCAAG
CAGTTCGAGA TCCTCGGCAA GATCGACGAA GACTGGCGCG ACCATTTCGC GAATGTCGGC
GGCGCTCAGC CGTTCACCGC CGAGGACGCC GAGAAGCGAC AGCACTTCTT CGATTCGCTC
GTCAGCGAGA CTTCGCTGCA GGAGCACTTG ATGCAGCAGG TCGTGCTCAA CGATCTCGCG
CCGCCAGTGC ACGAAGCCTT GCACCAGCTG ATCGGTAATC TCGACGATCG CGGCTATCTG
GCGCAGTCGC CCTCGGACAT CGCGCTGCAA GCCAATCTGC CCTACGCAAC CGTGACCGAA
GCGCTGAAGC TGCTGCAGAG CTTCGATCCG CCCGGCATCG GCAGCCAGAC GCTCGCCGAC
TGCCTGCTCG CGCAGCTCCA CGCCAAGGGT CGCGGGGACA CGCTCGCCGC GCGCATGCTG
CGCGATCACT TCGAGCTGCT TTCGCGGCGG CGCATTCCCG AGCTCTCCCG CAAGCTCGGC
GTCGCCGCCG ACGACGTGCA GGCGGCCATC GAGGAAATCG GCAAGCTCGA TCCCGCGCCG
GGCCGCCGTT TCGCCGAGGA CAGCAACCGC GTCGTCGTGC CCGATGTGGT CGTCGAGAAG
GAAGGCGACG AGTGGAAAAT CCATCTCAAC AGCGACTACA TTCCGCGGCT CCGGCTCTCC
AGCACCTACC GTGAGCTGAT CGCCAAGGGC ACGCTCTCGA AAGAGGAACG CGATTATCTC
CGCGAACGGA TGCGCTCGGG CAAGTTCCTG ATCGATTCGA TCGAGCAACG GCAGCGCACG
ATCGAGCGGA TCACCCGCGA GATCATCAAC GCGCAGCTCC CGTTCTTCGA ACACGGCGTG
TCGCAGCTGC GGCCGCTGAC GATGACGCAG ATCGCGGACG TCGTCGGCGT GCACGAGACG
ACGGTCAGCC GTGCGATCGC GAACAAATAC ATGAAGACCC CGCACGGCGT CTTCGAATTC
AAGTATTTCT TCACCACCGG CTATCAAGCG GAGAGCGGCG ACTCGGTTTC GAACACCAGC
GTGAAGGAGA TGCTGGCCGA CCTGATCGCG CTCGAGGACA AGTCCGCCCC CTTGAGCGAT
CAGGAGATCG TGGCGAAGCT TCAGGAAAAG GGCATCACGC TCGCACGGCG CACCGTCGCG
AAATATCGCG AGGAGCTTGG CATCCTCCCG AGTAATCTGC GCCGCGACTA CAAGTAG
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| Protein sequence | MSGPSFSHDL RQRQTQSLVL APQLRQSLKI LQVAALDLRS VIQEELQANP TLEELPMEGE
SVEKPAETDA PNDTSTPGEH EDVAPPGDDS PTRDELDFTK QFEILGKIDE DWRDHFANVG
GAQPFTAEDA EKRQHFFDSL VSETSLQEHL MQQVVLNDLA PPVHEALHQL IGNLDDRGYL
AQSPSDIALQ ANLPYATVTE ALKLLQSFDP PGIGSQTLAD CLLAQLHAKG RGDTLAARML
RDHFELLSRR RIPELSRKLG VAADDVQAAI EEIGKLDPAP GRRFAEDSNR VVVPDVVVEK
EGDEWKIHLN SDYIPRLRLS STYRELIAKG TLSKEERDYL RERMRSGKFL IDSIEQRQRT
IERITREIIN AQLPFFEHGV SQLRPLTMTQ IADVVGVHET TVSRAIANKY MKTPHGVFEF
KYFFTTGYQA ESGDSVSNTS VKEMLADLIA LEDKSAPLSD QEIVAKLQEK GITLARRTVA
KYREELGILP SNLRRDYK
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