| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2644 |
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| Symbol | |
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| ID | 6206912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3389442 |
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| End bp | 3390281 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692304 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001819525 |
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| Protein GI | 182414459 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.263697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTG ATCCTAGCCC GGGCGGGCCG CTGCCGGAGA TCATGTCGCG CCGCGCCTGC
GCGTGGCCGC GCCGGATGCA GCAGGGCCCG GCGCGGCTGA TCACGGCGGA AGAGCTGCGC
ACGTGGATCG TGCATGAGGA CGAGCGACTG CTCGTGGTCG CCAAGCCGGG GGACGTGGTT
TGCCACCCCT CGAAGGCCGG GCCGTGGTCG AGTCTGGTCG GCGCGGTGCG GGAGTTCACC
GGACTCGCGA CGGTGCATTT GGTCTTTCGA CTCGACCGCG AGACCAGCGG AATCGTCGTG
CTCGCCAAGG ACCCGAAGAC CGCCAGCCGG CTGCAGGTCG CGATGCAGGA GCGCAAGATC
GGCAAGGCTT ACGTCGCGAT CCTGACCGGG GCGATGCGCG AACCGGTGAC CGTCGATCAG
CCGCTGGGCG ACGACGTGGC CAGTCCGGTT TTCGTCAAGT CGGCCGTGCG CGCCGACGGC
CAGCGCTCCG TCACGCATTT TTCCCCGATC ACGGTGGCGG CGGATGATGC TTTTTCGCTG
GTCCGCGTGG TGACCGAGAC CGGACGCAAG CACCAGATCC GCGCCCATGC GCAGTGGCTC
GGTCACAGCC TTGTCGGCGA CAAAATCTAC GGTCCGGACG CGCGCTGCTA TCTCGATTTC
ATCGACACGG GCTGGACGCC GGCGCTGGCG GACAAGCTCC TGTTGCCGCG GCAGGCACTG
CATTGCGCCG AGATCGATCT CACGCGCACA GGTCTCGCCC ATGTGTTTCG CGCGCCGATG
GCCGAGGACA TGCGACGGTT CTGCGCCGAG CGTGGCATCG TCGCGCCGGC GGAGCTATAG
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| Protein sequence | MIPDPSPGGP LPEIMSRRAC AWPRRMQQGP ARLITAEELR TWIVHEDERL LVVAKPGDVV
CHPSKAGPWS SLVGAVREFT GLATVHLVFR LDRETSGIVV LAKDPKTASR LQVAMQERKI
GKAYVAILTG AMREPVTVDQ PLGDDVASPV FVKSAVRADG QRSVTHFSPI TVAADDAFSL
VRVVTETGRK HQIRAHAQWL GHSLVGDKIY GPDARCYLDF IDTGWTPALA DKLLLPRQAL
HCAEIDLTRT GLAHVFRAPM AEDMRRFCAE RGIVAPAEL
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