| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2637 |
|---|
| Symbol | |
|---|
| ID | 6207084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3380994 |
|---|
| End bp | 3383384 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692297 |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_001819518 |
|---|
| Protein GI | 182414452 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase
[COG0812] UDP-N-acetylmuramate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.202309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CTGCGCTGCC TTCCGTCTTC GGCCGCAGCG TGCGGAGAAT CCACTGCGTT
GGCGCGGGCG GCATGGGCGT GGCACCGCTG GCGATTTATC TGCGCCGGCT CGGCTTCACC
GTCAGCGGTG AGGACGACGC GATGATGCCC GAGGTGCGCG AGTTGCTGGA GCGCGCCGGA
GTGCGGGTGG GTCCGATGGA CGCGGATTGC GAACTGATGG TGCATTCGTC GGCGATCGCG
CCGGCGCATC CGGCGTTCGC GGCGGCCCGG GCGCGCGGAC TGCGCTGCGT GCGCCGCGGC
GAGATGCTGG CAGAGGTGGT GAGCGGGAAG AAGTTCGTGG CGGTGTGCGG GTCGCACGGC
AAAACCACGA CGACCGCGAT GTTGATCACG GCGCTGCGCA GCGCGGGCTT TCCCGCGGGC
TACGTGTTGG GCGGACTTTT CACCGACGGC AGCTCACCGG CGGACGTCGG CACGAACGAA
TGGGTCGTGG CCGAAGTGGA CGAAAGCGAC GGGACGATCG AGCGCTTCGT GCCAGAAATC
ACGGTCGCCG TGAATCTCGA CTGGGACCAT CCGGATCACT ATCGCGATCG GGCCGAGCTG
GAGCAGACTT TCCATCATTT GTTCGCGCGG ACCCGCGGGC TGGTTTTGTT CAGCGCGGAG
TGCGCGGTCA GTCGGCGGAG CGCGACGGAA CTGGCGGCGA TGGAGGAACA CCGGATCGAG
GCGGAGATCA CCGGGCCGAA TTTTCTGAGT TTCGGGACCG CGGGAGATTT TTCCGGACGG
ATCGTGCGCG AAGACGGCGC GCGGATGACG CTGCAGCTGG ACGGTCGCTT CGCCAGTCGC
GAGACCGCCG TGCAGGCACG CGGGGCGTTC AACGCGGCGA ACGCGACGGC GGCGCTGGCG
GCTGCGCAGG TGATGGGTGC GCGCCCCGGC GGCGACGCGC TGGCCAATTA TCCGGGCGTG
CGTCGGCGGC AGACCGTGTT GCACGACGAC GCGTTTACGG TGATTGAGGA TTACGCGCAT
CATCCGGGGG AGATTCGCGC GTTGCTCGGC AGCCTGCGCG AACGGTTGCG GCGTAAGCAG
CCCGCGGCGG ACAAGCGCGG CGCGGTCGGC CGGTTGATCG TGGTCTTTCA ACCGCATCGG
TTCAGTCGCA CGGCGCAGTT CAAGGTGGAT TTCGCGCAGG CGCTCGGCGC CGCGGACTGG
CTCTACCTGC TCGACGTTTA CGGCGCGGGC GAGGCACCGA GGACCGGTGG CATGACGGCG
GACGTGGCGG CGGCGGCGGG ACGGCAGAAC CCAATGCTGC CGATCGACTA TCAGCCCGGC
GCCGATCGCC GGTGGTTCGA TGCGCTCGAT CGCCAAGTGC GGCCGGGCGA CCTGGTGGCC
TTCGTCGGCG CGGGAGACAT CGATCGCAAA GCGCGGGCCT GGATCGAGCG CCGGACCCGC
AAACCGCGCA GGGCGGGCGA TTGGGACGCC GTGCTGACGA AACTGCAGCG CGTGGTGTCG
GCCGAAACGA GCCTGCGACG CGACGAGTTG CTCGGCCCGA AGACGACGAT GCGCGTCGGC
GGACCGGCGC GGATTTATGC CGAGCCGGCG AGCGTCGCGG ATCTGCAGGC GTTGTTGCGC
ACGGCAACTG CCGTGCCGGT CGAGGTGTTC ATCCTCGGTC GCGGATCCAA TCTGCTGGTC
CCGGACGAGG GCGTGGAAGG GCTGGTGATC TCGCTCGCGC ACGAGGCTTG GGCGCAGTTC
GAGGTGCGGC CAGACGGAAG GATCTGGGTC GGCGCGGGAC TTCGACTGAA AAATCTGTGC
GGACTCGCAG CCAAGGCGGG GTTGAGCGGA TTCGAATTTC TCGAGGGCAT TCCCGGCAAT
GTGGGCGGCG CGCTGCGAAT GAACGCGGGC GCGATGGGCG GCTGGATGTT CGACGTCGTC
GACGAGCTGC AACTGATGAC GATGGCAGGC GAGGTACAGT CGCTGCCGCG TACCGCGCTG
AAGGTGACGT ATCGTCATTG CCCGGAGCTG GAGCGGGCGA TCGGGTTGGG GGCGTTGTTG
CGCCGGCCGG CTTACGCGAA CGCGGAAGTG GTGAATCAGC AGATCGCGGC TTACCGCACG
AAGCGGCAGG CGACGCAGCC GCGCGAACCG AGCGCGGGAT GCATTTTCAA AAACCCCCCG
GGGACGTCCG CTGGCCGGTT GATCGACGAA AGCGGGTTGA AGGGTACGCG CGTCGGCGAC
GCCGAAGTGT CGCCGGTCCA CGCGAACTTC ATCATCAACC GCGGCCACGC GACGGCGGCC
GAAGTGCTCG AGCTGGTCCG GCGGGTGCGC GCTCGGGTGA AGGAGGTCAA GGGCATCAAC
CTCGAGCCCG AGGTGCTGCT TTACGGCAAA TTGTGGGAGG ATGTGCTGTG A
|
|---|
| Protein sequence | MSDAALPSVF GRSVRRIHCV GAGGMGVAPL AIYLRRLGFT VSGEDDAMMP EVRELLERAG
VRVGPMDADC ELMVHSSAIA PAHPAFAAAR ARGLRCVRRG EMLAEVVSGK KFVAVCGSHG
KTTTTAMLIT ALRSAGFPAG YVLGGLFTDG SSPADVGTNE WVVAEVDESD GTIERFVPEI
TVAVNLDWDH PDHYRDRAEL EQTFHHLFAR TRGLVLFSAE CAVSRRSATE LAAMEEHRIE
AEITGPNFLS FGTAGDFSGR IVREDGARMT LQLDGRFASR ETAVQARGAF NAANATAALA
AAQVMGARPG GDALANYPGV RRRQTVLHDD AFTVIEDYAH HPGEIRALLG SLRERLRRKQ
PAADKRGAVG RLIVVFQPHR FSRTAQFKVD FAQALGAADW LYLLDVYGAG EAPRTGGMTA
DVAAAAGRQN PMLPIDYQPG ADRRWFDALD RQVRPGDLVA FVGAGDIDRK ARAWIERRTR
KPRRAGDWDA VLTKLQRVVS AETSLRRDEL LGPKTTMRVG GPARIYAEPA SVADLQALLR
TATAVPVEVF ILGRGSNLLV PDEGVEGLVI SLAHEAWAQF EVRPDGRIWV GAGLRLKNLC
GLAAKAGLSG FEFLEGIPGN VGGALRMNAG AMGGWMFDVV DELQLMTMAG EVQSLPRTAL
KVTYRHCPEL ERAIGLGALL RRPAYANAEV VNQQIAAYRT KRQATQPREP SAGCIFKNPP
GTSAGRLIDE SGLKGTRVGD AEVSPVHANF IINRGHATAA EVLELVRRVR ARVKEVKGIN
LEPEVLLYGK LWEDVL
|
|---|
| |