| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2604 |
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| Symbol | |
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| ID | 6207255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3340109 |
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| End bp | 3343873 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641692264 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001819485 |
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| Protein GI | 182414419 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.545668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG CGGACGCCAC TCACGACCTC TCCGCAACTC CACCCCGTGC GGGCGCTTCG
GCGGCGCCGG CGACGCGGAA TCCGCAGTCA CCAGGTGTGC GCCGCCGCGC GGAGCTCGCG
CGCCTAATCG CCAAGACGCT CGCGTTCGCG CTGGCGTTCG CCCTTTTCGT GCCCCGCCTG
CCGGCTGCCG AGGAGACGCC GCCGACGATC ACGACCGGTG CGGAGTTCTG GACACTCACC
AGCACGGCCG GCGATCGGGA ATATCCGATC CACGCGGAAA TCGGCGTCCA CTACTACGAC
TCCGAATGGA ACGTGCTCTG GGCCGAATGG GACGGCGCCG GTTGCTATCT GGATACGGGC
CGCATTCCCC TGCCGCTGCG TTCCGGCGAG AAGTTCGAAA TCATCGGCGT CGCGCGTCCG
GGCCGCCAGC AGATCGTGTG GGAACGCACC ACCATCAAAC CGCTCGGGCC GTTCGCACCC
ACGCCGAGCG CGATCCCCGA TTCGATTTCC GCACCGGCCG ATTTCAACCT CCGGCTGGTG
ACCGCCACGG GGCTCGTCAC CGAGCAGGCC GACTCCGACG CGACGCACCA GCGACTCCTC
GTCGTCGGCG ACAACTGGTC GCTCACCGCC CATGTGCACG TCGACGCGAG CCAGCCGATT
CCCCAATGGC GCGGCGCGTA TGTGCGGATG CGCGGCGTCT TCGCCGCGAA ATTCGACACG
GCGCAGAAAC AGCCTTTCAT CGAGATGTGG ATCGTAAGCC CCAGCCACAT CGAGCTGCAG
TCGTGGCTCG ACGACGACTA CCGCTTCACG CTGACCCGCA CGAACATCGA GGCTCTGGGC
CGCGTTCCGC GGGATCAACT GGTCCGGATT GCAGGCACGG TGCGCGCGCA GGAGCCCGGG
CAGTCGCTGA CCGTGCGGGA CGAAACGGGA CAGGTGCGGC TGTTCACGCG TCAGCCGAAC
GTGCTCCCCA CCGGCGCCGA GGTGGAGGCG ATCGGCTATC CGGACGTCGT CGGCGTGGAA
CCACGCCTGC TGCGGAGCGT AGTCCGCCCA CGTGCCGCGA CCGTCAACGA ACCGCTGTCT
CCTGGCCTGC GGGCGGTGAA GGCGCGACTT CGCATGACCG AGCAGGTTCG CCAGCTGGCA
CCCGCCGAGG CCGCACGCGG TTATCCCGCC GAACTGCAGG GCGTCGTCAC TTGGATCGAT
CCGTCCGGCA GCTGGTTCTT CCTGCAGGAT GCCACCGGCG GCGTGCGGGT GCAGCTGCCG
CCGGATTCCT CGATCGAGCG CCCGAAGCTG GCCATGGGCG TGGTCGTCAC CGGCGCAACC
CAATCGGGCG ACTACGCGCC GGTCATTGCG GCGGAGCGAT GGACGACCGG GCTCGGGCAG
ACGTTGCCCA CGCCGGAACG GGTGACCTTC GAACAGGCGT TGGCGGGGAC CAAGTATGGC
GAGTGGATCG AGCTCCGCGG CTATGTGCGA TCGGTCGAGG AACCCCGCGA CGGGTTGGCG
CAGGTCGAGC TCACCACGCC CGGCGGTGAG TTGGTGGCGC ATGTGCCGGC ACTGCCGCCG
GACCACGGGC TGGTGGGTGC GCTGGTCGAT CTCCGTGCGG TGTGCGACGT GGTGGTGAAC
GACCGCCGGC AACTCGTCGG CGCCCGGCTG TGGGTGCCTG GCCAGGAATT CATCGAAGTG
CGCGAGCCCG CTCCCGCGGA CCTCTTCGCC ACTCCGAAAC AACCCATTGG CAGCCTGCTG
CAGATCGGCT CCGCCGGCCA GCTCCACCGG CGCGTGCAGG TTTCCGGCGT CGTCGCACTG
CATCGACCCG GAGTCTTACT TTATCTCGAG GAGGGCGACG ACCATCTGCT CGTCCTCAGC
CGGCAGCGGG ATCCGCTGCA GCCCGGCGAT CGCGTCAACG TGGTGGGCTT TCCCGGCCAT
GAGGGCATGC GGTTGATCAT GCGCGATGCG GTTTATCACC GCACCGGCAC GGGCCCTGCA
CCGGCGACCC ACGCCGTGGC GCTCACCGAG CTCGACCCGC CGAACCCGGC GCTGGACGGC
ACCAGCGTGA GCGTGCGCGG CCGGCTGCTG GACCAGGCCG CCACGCCGGA AAACACCAAA
CTCCAGCTCC AGCGCGGACG CACGCTGTTT GAGGCGGCGT GGAGCGGGCC GAGCGATCGG
CCGCTCGAGT TGGGCAGTCT GCTCGAACTC ACCGGGGTCT ATCGCGTGCT GCTCGACGAA
TACCGGCAGC CGCACGCCAT CCGGCTCGAG TTGCAGTCCC CTGCGGACGT GCAGGTGCTG
GAGCGCCCGC CGTGGTGGAC AGCCTCGCGC GTGCTGTGGA TTGTCGCCCT GCTGTTGGGA
ATCGTCGCGA CCGCGCTGGT TTCGCTCGCG CTCCTCGCCC GCAAAAACTC CCAGCTGCAT
CGGGCCGAGA CCGCGTTGCA GCGCGCGAAC AGCGATCTTG AGGCCCGCGT GGCGGCGCGC
ACGCAGGATC TGCGACTCGA GATCGGCGAG CGCCAGCGGT CCGAGGAAGT CCTCGCCGAG
GAGCGCAAGC TGCTCCGCAC GCTGATCGAC AACCTGCCCG TCTACCTCTA CGTCAAGAAC
GCCCTCGGGA AGTTCGTGGT CAGCAACGCG CCGCATGCGC GGCTGCTCGG CGTGGACGAC
GGGCTCGCCG TCGTCGGCCG CACCGACTTC GACATTTACC CACGCGAGAT CGCCGAACGC
TACGCGGAGG ACGATCAGCG CGTGTTGCAG ACGGGTGAGC CGCTTATCCT GCATGAGGAG
CCCAGCAGCA TCAACGGTCA TCCCTGCTGG CTGGCGACCA CGAAGGTGCC GTTGCGCGAT
CGCCGCGGCC AGATCGTCGG GTTGATCGGC ATTTCGCAGG ACATCACGGA ACGCAAGGAG
GTCGAGGCGG AGCGCGAGGA GTTGAACAAC CAGCTGCTCA CCATCTCGCG CAAGGCAGGC
ATGGCCGAGG TCGCCACCGG CGTGCTCCAC AACGTCGGCA ACGTGCTCAA CAGCGTGAAC
GTGTCCGCTT CCATGGCGGC CGACCACGTG CGGCGCTCCA AAGCGGTCAA TCTCGCACGC
ATCGTGGACC TGCTCCAGGA GCACAGCGGC AACCTGAGCG AATTCCTCAC CTCTGATGCC
CGCGGCCGAA AAATCCCCGC CTATCTCGGC GCGTTGAGCG GCGAACTCGT CACCGAGCAG
CAGAAGATCG TCGAGGAACT CGAGCTCGTC CGCCGCAACA TCGATCACAT CAAGGAAATC
GTCACGATGC AGCAGAACTA TGCGAGGATC TCGGGCGTGA CGGAGGAGAT CGATCTCATT
CCACTGGTCG AGGACGCGCT CCGGATGAGC CAGAACGCGT TTCAGCGCTA CGGGATCGCC
GCGGTGCGCG ATTTCTGCGC GCGGCCCGTG CTGGTGAGCG ATCGGCACCG GCTGATGCAG
GTCCTGCTGA ACCTGATCAA CAACGCCAAG GACGCTTGTC GCGATACCAA GCAGGCCGAG
CGCCAAATCA CGATCCGGAT CACGGAGGAC GACGCCCGCA TCCGCGTGGC CGTGATCGAC
AATGGCGTGG GCATCGCGAC CGAGAACCGC ACGCGGATCT TCAGCCACGG TTTCACCACG
AAAAAGGAAG GACACGGCTT CGGCCTGCAC AGCTCGGCGC TCGCGGCGAA GGAACTGGGC
GGCTCGCTCG AGGCGCACAG CGAGGGTGTC GGGCAAGGCG CCATGTTCAC GCTCGAGCTT
CCGCTGACGA TCGGCTCCAC CGCCGCCCGG CAGTCAACGT CCTGA
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| Protein sequence | MNDADATHDL SATPPRAGAS AAPATRNPQS PGVRRRAELA RLIAKTLAFA LAFALFVPRL
PAAEETPPTI TTGAEFWTLT STAGDREYPI HAEIGVHYYD SEWNVLWAEW DGAGCYLDTG
RIPLPLRSGE KFEIIGVARP GRQQIVWERT TIKPLGPFAP TPSAIPDSIS APADFNLRLV
TATGLVTEQA DSDATHQRLL VVGDNWSLTA HVHVDASQPI PQWRGAYVRM RGVFAAKFDT
AQKQPFIEMW IVSPSHIELQ SWLDDDYRFT LTRTNIEALG RVPRDQLVRI AGTVRAQEPG
QSLTVRDETG QVRLFTRQPN VLPTGAEVEA IGYPDVVGVE PRLLRSVVRP RAATVNEPLS
PGLRAVKARL RMTEQVRQLA PAEAARGYPA ELQGVVTWID PSGSWFFLQD ATGGVRVQLP
PDSSIERPKL AMGVVVTGAT QSGDYAPVIA AERWTTGLGQ TLPTPERVTF EQALAGTKYG
EWIELRGYVR SVEEPRDGLA QVELTTPGGE LVAHVPALPP DHGLVGALVD LRAVCDVVVN
DRRQLVGARL WVPGQEFIEV REPAPADLFA TPKQPIGSLL QIGSAGQLHR RVQVSGVVAL
HRPGVLLYLE EGDDHLLVLS RQRDPLQPGD RVNVVGFPGH EGMRLIMRDA VYHRTGTGPA
PATHAVALTE LDPPNPALDG TSVSVRGRLL DQAATPENTK LQLQRGRTLF EAAWSGPSDR
PLELGSLLEL TGVYRVLLDE YRQPHAIRLE LQSPADVQVL ERPPWWTASR VLWIVALLLG
IVATALVSLA LLARKNSQLH RAETALQRAN SDLEARVAAR TQDLRLEIGE RQRSEEVLAE
ERKLLRTLID NLPVYLYVKN ALGKFVVSNA PHARLLGVDD GLAVVGRTDF DIYPREIAER
YAEDDQRVLQ TGEPLILHEE PSSINGHPCW LATTKVPLRD RRGQIVGLIG ISQDITERKE
VEAEREELNN QLLTISRKAG MAEVATGVLH NVGNVLNSVN VSASMAADHV RRSKAVNLAR
IVDLLQEHSG NLSEFLTSDA RGRKIPAYLG ALSGELVTEQ QKIVEELELV RRNIDHIKEI
VTMQQNYARI SGVTEEIDLI PLVEDALRMS QNAFQRYGIA AVRDFCARPV LVSDRHRLMQ
VLLNLINNAK DACRDTKQAE RQITIRITED DARIRVAVID NGVGIATENR TRIFSHGFTT
KKEGHGFGLH SSALAAKELG GSLEAHSEGV GQGAMFTLEL PLTIGSTAAR QSTS
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