| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2602 |
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| Symbol | |
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| ID | 6206469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3335944 |
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| End bp | 3337371 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641692262 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001819483 |
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| Protein GI | 182414417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.178809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCC AGCCGGCCGC AACTTCACCG CAAGCACCCA CGGACCTGAA GGGCTTCTAC
AAGCTCTCGC GCCTCACTCG CATCGGCTTC GGTGCCGGCG ATCTCGCGCA GAACCTGATC
TACCAGACGG TCGCCACGTA TCTGCTGTTT TTCTACACGA ATGTGTTCGG AATCAGCCCG
GGCGCCGCGG CCTTCATGTT CCTGGTGGTG CGGGTGATCG ACGTGCTCTG GGATCCCTTC
GTCGGCGCGT TCGTCGACAA GCGCAATCCG CGTCTGGGAA AATACCGCGC CTACCTGATC
ATCGGAGGCA TCCCATTGAG CGGGCTGGCG ATCCTGTCGT TCTGGAACGG TTTCTCGGGC
CAGCTGTGGT ATGCCTACGT CACGTACGTC ACGCTTTCGC TGTGCTACAC GCTGGTCAAC
GTGCCCTACG GGGCATTGAA CGCTTCGCTG ACGCGCGACA CCGATGAGAT CACCAAGCTG
ACGTCGACGC GCATGTTCAT GGCGAACCTG GGCGGGTTGG CGGTGCAGTT TGGCGTGCCG
GCGACGATCC AGCACTTCGC TCCCAACCAC GACTGGTCGC AGCCCGCGGC CGCGCCGGTG
TGGTTTGCGG TGATGTCGGT TTACGCGGTC GTCGGATTCG GGCTCCTGAT CTATTGCTTC
ACCCAGACGC GAGAGCGGGT GGTGATGGAT TCCGCGAAGG TCGACGCGGT GAAGTATTCG
GACCTGTTCA CCGAGTTTGT CCGCAACCGG CCGCTGCGGG TGCTGGCGTT TTTCTTCATC
ACGGCCTTCG CCATGATGGC GGTCGGCAAT TCCGCCTCCG CGTACTACAT GCAGTACAAC
ATCGGCAACG CGCAGGCGCT GCCGGTCTTC AACGCGCTGA GCTCCATCCC CGCCTTCATC
TTCATGCCGC TGGTGCCGGC CATCAAACGC GCGATCGGCA AGAAACGGAT GTTCTACGTC
TTTCTGACGA TCGCCATCGT CGGAATGGCC ATGCTGTATG TCACCTCGAC AGTGCCGGCA
CTGAAGAGCC AGCTGTGGCT GGTCTATCTC GCACAATTTG TGAAATCGAC CGGCGTGATC
GTGGCGACCG GCTACATGTG GGCGCTGGTG CCGGAAGTGA TCTCCTTCGG CGAATGGAAG
ACGGGCAAAC GCATCTCCGG CGTGGTCAAC GCGCTGACCG GTATCTTCTT CAAAGCCGGT
TTCGCGCTGG GTGGCGTCAT CCCGGGTGTG GTTCTGTCAC TGACGCACTT CGACGCGCAC
AGCGCGCAGC AGTCGGTCGC GGCGCAGCAG GGCATCCTGT GGCTCGTGGT GGTCATCCCG
GCGATCCTGC TCGGCGTCGC GATGTACATC ATCTCGAACT ACGAGCTTGA GGACGACACG
ATCGACCGGA TCAACCGGGA GATCGAAGCG CGGCACAGCG CGGGTTGA
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| Protein sequence | MDLQPAATSP QAPTDLKGFY KLSRLTRIGF GAGDLAQNLI YQTVATYLLF FYTNVFGISP
GAAAFMFLVV RVIDVLWDPF VGAFVDKRNP RLGKYRAYLI IGGIPLSGLA ILSFWNGFSG
QLWYAYVTYV TLSLCYTLVN VPYGALNASL TRDTDEITKL TSTRMFMANL GGLAVQFGVP
ATIQHFAPNH DWSQPAAAPV WFAVMSVYAV VGFGLLIYCF TQTRERVVMD SAKVDAVKYS
DLFTEFVRNR PLRVLAFFFI TAFAMMAVGN SASAYYMQYN IGNAQALPVF NALSSIPAFI
FMPLVPAIKR AIGKKRMFYV FLTIAIVGMA MLYVTSTVPA LKSQLWLVYL AQFVKSTGVI
VATGYMWALV PEVISFGEWK TGKRISGVVN ALTGIFFKAG FALGGVIPGV VLSLTHFDAH
SAQQSVAAQQ GILWLVVVIP AILLGVAMYI ISNYELEDDT IDRINREIEA RHSAG
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