Gene Oter_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2554 
Symbol 
ID6206192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3286893 
End bp3287687 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID641692214 
Producthypothetical protein 
Protein accessionYP_001819436 
Protein GI182414370 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.509149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC TGAAGAAGTT CGTGTCGTTC TGGCTGATGC CCGTGCCGCT GAGCCTCACC 
CTGCTGCTCG TCGGGCTCTG GCTGCTTTCC GCACGGCGGC GGCCGCGACT CGGCCGATGG
CTGATCCTCG GCGCGCTGGC TTTTCTCCTG CTCGCTAGCA ACCGCGCGGT CAGCCTCTGG
CTCATCCGGC CCCTGGAGAC AACTTATCCG GCCATTCCGG AGTTTGCGCC GGCCACCGCT
CTACCGCCGA ATCTCGCCGG CTGCCAAGCC GTCGTGGTAC TCGGCGGCGG ACACAGCGAC
TCGCCGACAC TCTCCGCGGT CAACCAGCTC AGCGAGTCCG CCCAAGGCCG GCTGCTCGAA
GCCTATCGCA TCCTGCGCGC GCTCCCGCCG GAGGCGCGGC TGATCGTCTG CGGTCGCGGC
GGACCCAACC GCCCGAGTCA TGCGTCCGTG CTCGCCCAGG CCGCGACGTC ACTCGGCGTT
TCCCCACACC GGATCGTGCG ACTCGACACG CCGCGCGACA CCGAAGACGA AGCGGCGCAG
CTGCGCGAGC TGCTCGGTCG CGACACGCCG TTCGCGCTGG TGACCTCCGC GTGGCACCTG
CCGCGGGCGA CGGCGCTGAT GCGCGGCGCC GGCCTGCGGC CCGTCCCCTG CCCCGCCAAT
TTCGCGGGGA AACCCGGCGC CCCGTTCGAA TGGCTGGATC TGCTCTGCGG GCTCGACGGA
CTCGATCGCA GCACCAAGGC GATTCGCGAA CGGCTCGGCT ACGTCTGGTC GGCCCTGCGC
CGAAAGACTG CTTGA
 
Protein sequence
MFLLKKFVSF WLMPVPLSLT LLLVGLWLLS ARRRPRLGRW LILGALAFLL LASNRAVSLW 
LIRPLETTYP AIPEFAPATA LPPNLAGCQA VVVLGGGHSD SPTLSAVNQL SESAQGRLLE
AYRILRALPP EARLIVCGRG GPNRPSHASV LAQAATSLGV SPHRIVRLDT PRDTEDEAAQ
LRELLGRDTP FALVTSAWHL PRATALMRGA GLRPVPCPAN FAGKPGAPFE WLDLLCGLDG
LDRSTKAIRE RLGYVWSALR RKTA