| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2525 |
|---|
| Symbol | |
|---|
| ID | 6207604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3253276 |
|---|
| End bp | 3253821 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692185 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001819407 |
|---|
| Protein GI | 182414341 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.271713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.184582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGC TTCATGCTTA CTGGCGTATG GAATACATCC AGGCGCCGCG CTATCCCGCC
CGGATGAAGC GCCCGTTTAC TGAGCTGCCG GCGCTCGGCG ATGACCGCGC GGCGCTCATC
GTGCATCGGG CCCGCCATGC CTACCTCGTG ATGAACCGGT TTCCCTACAA CCCCGGCCAC
CTGCTGGCCG TGCCGTTTCG GGAGGTGAAC GAACTCGAAG CCCTGACGCC AGCGGAGGCT
GCCGGACTGA TGGCCGAGAT CATTTTTGCC AAGCGACTGC TCACCGCCGC GCTTTCGCCG
GACGGTTTTA ACGTCGGATT CAACCTCGGC TCTGCCGCCG GCGGCAGCAT CCCGCATCTG
CACGCCCACG TGGTTCCGCG GTGGAACGGT GACACCAACT TCATGCCGGT TATCGGCCAG
ACCCGGACGC TGCCACAGTC GCTCGACGCC ACGTGGGAAC GGCTGGCCGC CGTGGCGCGC
GAGCTGCGGG CCGGCGGCCG CCCCGCCCCG CAGCGCCGCG CCAGCCCCGC CCGCCGCAAG
AAATAG
|
|---|
| Protein sequence | MQQLHAYWRM EYIQAPRYPA RMKRPFTELP ALGDDRAALI VHRARHAYLV MNRFPYNPGH
LLAVPFREVN ELEALTPAEA AGLMAEIIFA KRLLTAALSP DGFNVGFNLG SAAGGSIPHL
HAHVVPRWNG DTNFMPVIGQ TRTLPQSLDA TWERLAAVAR ELRAGGRPAP QRRASPARRK
K
|
|---|
| |