| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2518 |
|---|
| Symbol | |
|---|
| ID | 6206149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3244082 |
|---|
| End bp | 3245011 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819400 |
|---|
| Protein GI | 182414334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.744051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGC ACTTTCATCC CCGCTCCCCT TTGCCCCGCG TCCGTCGGTG GCTCGTTCTC
GCCGTCACCG CGTCCGGCCT GTTCACCGGC ACCGCGCCCG CCGCGCCGAT TTGGGACTTT
CCTCAACCGC ATCCCGTCGG CGACCCGAAC GTCGCCACTA GCGTCGTGCT GCGCTCCGTG
ATCGGCGTGT ACGACGCCGC GCCCCCGCCG GCAACCATCA CGGTGCCCGT CACCGGCTCG
GTCAACTTGT CCGTGCCGCT CGATGACAGG GAGATCGCTG CCGTGTCGTG GTTCAAGGAC
GGCGAGCGAC TCGCCGCTAC GGGTCGCACC CTGGCCCTGA CGAAGCTCAA AGCGACCGAC
TCCGGACTCT ACACGGCCAC GGTCCAGCGC ACGGTCGAGT CGCCGATGCC CTACTCGTCA
GCATTCGAGA CGATTCGCCT CGAAGTGGGT AATCCCACCT CGTGCAAGCT GGTCAACATT
TCGAGCCGCA CGACGATCAG CCCCGCCAAT CCGACGCTGA TCGTCGGTTT CGTGGTGGGC
GGCTCCGACC GGATCACGCC CTTAAAACAC CTGCTGATCC GCGCCGTCGG TCCGAGCTTG
GTAGGAGTGG GCGTGCCTCA GACCTTGGCG GCACCACAAG TCACGTTGTA TGACGCCCGC
GGGCAGAAGA TCGAGTGGCC GGATGTGTGG ATTCCGGAAT GGGATCCGTA TCGTCTGGCG
AGCGTCGTCG CGCCCATCAT CGGCGCCATG CCGCTGCTGC CGGGAGCGCA GGATTTCGCC
ATTCTCTACT CGCTCGCTCC CGGTGCCTAC ACGGCCCATG TCTCCAGCCG CGACGGGGGT
TCGGGTGACG TGCTGTTCGA GGTCTACGAG GTGCCAGCCG AACTGATTCC CGTCTTCGGC
GAGGAAACGC CGACGCCGCC GAAAAGCTAA
|
|---|
| Protein sequence | MLKHFHPRSP LPRVRRWLVL AVTASGLFTG TAPAAPIWDF PQPHPVGDPN VATSVVLRSV
IGVYDAAPPP ATITVPVTGS VNLSVPLDDR EIAAVSWFKD GERLAATGRT LALTKLKATD
SGLYTATVQR TVESPMPYSS AFETIRLEVG NPTSCKLVNI SSRTTISPAN PTLIVGFVVG
GSDRITPLKH LLIRAVGPSL VGVGVPQTLA APQVTLYDAR GQKIEWPDVW IPEWDPYRLA
SVVAPIIGAM PLLPGAQDFA ILYSLAPGAY TAHVSSRDGG SGDVLFEVYE VPAELIPVFG
EETPTPPKS
|
|---|
| |