| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2512 |
|---|
| Symbol | |
|---|
| ID | 6208507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3233710 |
|---|
| End bp | 3234654 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692172 |
|---|
| Product | aspartate carbamoyltransferase |
|---|
| Protein accession | YP_001819394 |
|---|
| Protein GI | 182414328 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.287204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGA CGCGCCGACA TCTTCTCACC CTCGAGGAAC TTTCCCGCGA GGAAATCGAC
CAAATCCACG CCACGGCGGC AGCCTTCAAG CGCACGTTGT CCCGCCGCGT CAAAAAGGTT
CCCGCCCTTC GCGGCAAGAC CATCGTCAAC CTTTTCCTCG AGCCGAGCAC GCGCACGCGC
ATGGCCTTCG ACATGGCCGC CAAGCGGCTC AGCGCCGATG TGATTTCCTT CGACGCCGCC
AGCAGCAGCA CGACCAAAGG AGAAACGCTG CACGACACCG CCAAGAACAT CCAGGCGCTC
GGCGCGGACA TGATCGTCAT CCGCCACGCC GCCGCCGGCT CGCCGCTGTA TCTCTCGCGA
ATCCTGGACA TTCCCGTGAT CAACGCCGGC GACGGCGCGC ACGAGCATCC GACGCAGGGG
CTGCTCGACA CGTTCACGAT GAAGGAGCAC CTCGGCAGCC TGAAGGGCCG CAAAATCGTG
ATCCTCGGCG ATATTCTTTT CAGCCGCGTG GCGCGCTCGA ACATTCACGC GCTGACGAAG
CTCGGTGCAA ACGTCACGCT GGTCGGCCCG GCGACGCTCG TGCCGCACTG GTTCACCGAT
CTCGGTGTCG AGGTCTCGCA CGACCTGCGC ACGGCGCTCG CCGATGCCGA GGTCGTGATG
CTGCTGCGCA TCCAGCACGA GCGCCAGTCG AGCGGCCATT TCCCGTCGCT CGGCGAGTAC
ACCAGCATGT TCGGATTGAA CAAGACCCGC GCGAGCTGGC TGAACCCGAA GGCGATCATC
ATGCACCCCG GCCCGATCAA CCGCGGCGTG GAGATCGACA GCGATCTCGC CGACGGCGAC
CACAGCGTGA TCCTGGAACA GGTGAACAAC GGCATCGCGG TCCGCATGGC CGCGCTCTAC
CTCTGCGCCG GCGGCCAGCC GGAAAACGTC GCGCCGATCG AGTAA
|
|---|
| Protein sequence | MPWTRRHLLT LEELSREEID QIHATAAAFK RTLSRRVKKV PALRGKTIVN LFLEPSTRTR
MAFDMAAKRL SADVISFDAA SSSTTKGETL HDTAKNIQAL GADMIVIRHA AAGSPLYLSR
ILDIPVINAG DGAHEHPTQG LLDTFTMKEH LGSLKGRKIV ILGDILFSRV ARSNIHALTK
LGANVTLVGP ATLVPHWFTD LGVEVSHDLR TALADAEVVM LLRIQHERQS SGHFPSLGEY
TSMFGLNKTR ASWLNPKAII MHPGPINRGV EIDSDLADGD HSVILEQVNN GIAVRMAALY
LCAGGQPENV APIE
|
|---|
| |