Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2497 |
Symbol | |
ID | 6204950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3215571 |
End bp | 3218666 |
Gene Length | 3096 bp |
Protein Length | 1031 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641692157 |
Product | histidine kinase |
Protein accession | YP_001819379 |
Protein GI | 182414313 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0918719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA ATCGCCCGAT GACCGCCAGT TCACGCGCCC AGCCCAGGCT CGTCCGGGGG ACTCGCGGCT GCGCGTTTGC GCCGATCCCC CGGGTCGCTG GCTGGCTCGC CTTGGTGCTG TTGCTCGGCG GGCTGGCGCA CGCACGCACT GCCGGGCCGG TGGTCGGCAA TCCGCTGACG CGTTTCTATC CCTACGAAGA GATCGGTCGG GTGTCGCGCG GCGTGCATCT GAATTTCGAT GCGCTCGGCC GACTGGCAGT GGTGCAGGAA GACGAATACA TCGTCCTGAA CGATAATCTC TGGCTGCGCC TGTCGAGCCC GGCGCTGGCT GGCATTGGCA TGTATGCGGC GACCCCCGAT CTCGACGGCT CGTTAGTCTA CGGCGCGCTG GGCTCGTGGG GCCGGCTCAC CCCGGAGCCG AGCGGACAAT TGCGGCCACA ATCCTTCGTG CCGAAGACCT ACCCCAAGTG GGTGCTCGCC ACGAATTTCG CCGAAATCGT TTGCCGGCCC GAAGGCGTCT ATTTCGCCGG TTGGAACGGC GTCGTGTTCC GCGACCGCCA GACCGGCGAG CACCAGTTCT TCGAGGTTCC CGGCGTCTCG TGCCTCTTCG TGTTCGAGAA CACGATCTAT GTCTCGTCAC ATGACCGCGG AGTGCTGATC CTCGATGCTT CGCGTCAGAC CCTCACCACC GCCGACCGGC GGGTGTTCGG GAGTAGGGCG GTTGGCCGAT TCGCCCGGCT CGGCCCGAAC TCCGGTCTGC TGGCCACCAC CTATCGCCAC CTCCTCCGCT ACCGTGGCGG GGCGCTGGAG GACCTGCCGC CGCCGCTCGG GCCCCAGCTT CTTGCCGGGG TGACCGCGCT GCAGGCGCTG CCCGAGGGCG GCGCCGCCGT CTCGGTCGGC GGCATCGGGG TCTACATTGT GGATACGGAA GGTCAGGTGC GGTTCGCGCT CACCGGTCCC GAATACTCGC GCGTCACCGC CCTCGCCAGC CGCGAGCCTG GCGTGCTGTG GGCGGCCAAC GAAACCGGCG TGCTCAAGAT CCTTTACGGG CAGCCGTTCA CGCGGTTCGG CCAAACGCTC GGACTGCCGA TCAGCTGGCC GCAGGTCGTG TCGTGGCGGG GCGAGATCGT CATCGCCTCC GCCGGGCGTC TCTACAGCCC GGTTCCCACG GCCATTGAGG GTCCCGCGCA GTTTCAACCG GTGCGCGGCC AACCCGGAGC CGGCGCTTGG GGGATCGCCG TGGTGGGCGA CGCGCTGCTC GTCAGCAACC ACGACGGCGT TTACGTCCAT CAACCCGATG CCGACTTCGC CCTCGCCGTG CCCGGCGTCG GCGGTGCCCG GCTGGTGCCG GTGGACGCCA CCACCTGCAT CGTGATCGGC GAAAAAGAAA TCAGCGCGAT CCAGGTGCGC GACGGGCATT GGTCGGAGTG CGCTCCGCGC ATTCCGGGCG TCGGTTACCC GGCTATCGTC CACGCCGGTC AAGGCGCAGC CTGGATCGAG CTCGGCGTCA ACCGCGTCGC CCGCATCGGG CTGAGCGCGG GCCGGCTCGA ATCCCGTGTC TTCGAAGAGT TCCCCTGGCC CACGCCCAGC TGGGTCAACG TGAGTGTGCT CGGCTCCACC GTGGTTCTCA GTGGTTCGGA AGGCCAGCGC GTGTTCTTCG ACGAACGCCG TCAGACTTTC ACCGCCGCGC CCGAGTTGAA CGAATTGTTT CGCCAAGCCC CTTATCCGCT CGTGCGCATC TGCGCCGACG AGACCGGGAC GTGGTGGGGC TCGCATCAAC AAGGGGTTCT CTGGGTGACT GCCCGCGCCG GCCGCTACAC CTTCGACTCG ACCAGCTATC AGGCGATCGA CGAACGCGTC CCGCTGATCC GCGCTCTGCC TAGCGGCGAG ATCTGGGTGT CCACCGGTCA ATCCCTCTAC CGCCTCGACC GGCACGGAAG CTCTCCCCCT GCCGCGGCCT TCTCGCCGGT GCTAGTCTCG ATTCGCGACA GCCGCACGAA TGCGGAGATC CCACGCCCGG CCGGCACTCC GGCCCTGCTG CAGCCGCTCG GTTACGATCA GAACAGCGTG CGATTCGATT TCTTCGCCGG CAGCTACGCC TCGATGCGGC CCCCTGCCTA CGAATACCGG CTCAACGACC AGCCGTGGGA ACAAGTCGCC TCCGGCTCCT CCGTCGCATT GTCCGATCTG CACGAGGGCG TCTACCGGCT CCGCGTCCGG CTCATCGACA GCCGTGGTCC GATCGGCGCC TCCAAAGCCT TCGGGTTCAC GGTCACGCCG CCTTGGTATC GGCACTGGTA TGTGCTGGCC AGCTACCCGA TCTTGCTCGC CGCCCTGCTG TTCGGGCTGG TGCGGTTTGC GATGCGCCGG GCGGAAGCGC GGAATGCCGC GCTGGAACAG CTGGTGGCGC AGCGCACCGG CGAGTTGCAG ACCACCATGC GCCAGCTGCA GCAGGAAACC CGCACCAGCG CCACGCTCGC CGAGCGCAAC CGGCTCGCCG GCGAGATCCA CGACAGCCTC GAGCAGGGCT TCACTGGTCT GACGCTGCAG CTCGAGACCA CCGCCGCCTT CTCCACCTGC TCCCCTGAGG TGAAGTCGGG CTTGGCGGTC GCTCTGAACA TGGTCGCGTT CAGCCGCAAC GAGGTTCGCC ACGCCGTCCG CGACATGCAC TCGCCGATCC TCGCCTCGGC GGATCTGGAG ACGGCGTTGC GGCAGATCCT CGCGCAGGTC GCGCCGCACG CCGACTACGC CAGGCTCCGG ATCGAAGGCT CGCCCGTGCG CCTCGGCTCC AGTGTCGAGC ACCACCTGCT ACGCATCGCC CAGGAGGCGA TCGCCAATGC CGTCAAGCAC GCCGCCGCCA GCCACCTCGC GGTCACACTC GCGTTTCGCA AGAGCGAGGT GGAGCTCGAC ATTCGCGACG ACGGCCGGGG ATTCGACCCC GCAGCCGTCC TGAACGCCGG GATCGGGCAT TTTGGGCTGC CCAGTTTCCG CGGCCGCGCC AACAAAATCG GCGGCACAGT CGAGATCACG AGTCGGCCCG GCGCCGGCAC GCGCATCACC GTCCGTGTGC CCGTCGAAAA GGCCGTGATT CTCTGA
|
Protein sequence | MEKNRPMTAS SRAQPRLVRG TRGCAFAPIP RVAGWLALVL LLGGLAHART AGPVVGNPLT RFYPYEEIGR VSRGVHLNFD ALGRLAVVQE DEYIVLNDNL WLRLSSPALA GIGMYAATPD LDGSLVYGAL GSWGRLTPEP SGQLRPQSFV PKTYPKWVLA TNFAEIVCRP EGVYFAGWNG VVFRDRQTGE HQFFEVPGVS CLFVFENTIY VSSHDRGVLI LDASRQTLTT ADRRVFGSRA VGRFARLGPN SGLLATTYRH LLRYRGGALE DLPPPLGPQL LAGVTALQAL PEGGAAVSVG GIGVYIVDTE GQVRFALTGP EYSRVTALAS REPGVLWAAN ETGVLKILYG QPFTRFGQTL GLPISWPQVV SWRGEIVIAS AGRLYSPVPT AIEGPAQFQP VRGQPGAGAW GIAVVGDALL VSNHDGVYVH QPDADFALAV PGVGGARLVP VDATTCIVIG EKEISAIQVR DGHWSECAPR IPGVGYPAIV HAGQGAAWIE LGVNRVARIG LSAGRLESRV FEEFPWPTPS WVNVSVLGST VVLSGSEGQR VFFDERRQTF TAAPELNELF RQAPYPLVRI CADETGTWWG SHQQGVLWVT ARAGRYTFDS TSYQAIDERV PLIRALPSGE IWVSTGQSLY RLDRHGSSPP AAAFSPVLVS IRDSRTNAEI PRPAGTPALL QPLGYDQNSV RFDFFAGSYA SMRPPAYEYR LNDQPWEQVA SGSSVALSDL HEGVYRLRVR LIDSRGPIGA SKAFGFTVTP PWYRHWYVLA SYPILLAALL FGLVRFAMRR AEARNAALEQ LVAQRTGELQ TTMRQLQQET RTSATLAERN RLAGEIHDSL EQGFTGLTLQ LETTAAFSTC SPEVKSGLAV ALNMVAFSRN EVRHAVRDMH SPILASADLE TALRQILAQV APHADYARLR IEGSPVRLGS SVEHHLLRIA QEAIANAVKH AAASHLAVTL AFRKSEVELD IRDDGRGFDP AAVLNAGIGH FGLPSFRGRA NKIGGTVEIT SRPGAGTRIT VRVPVEKAVI L
|
| |