| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2477 |
|---|
| Symbol | |
|---|
| ID | 6207834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3191348 |
|---|
| End bp | 3191686 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641692136 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_001819359 |
|---|
| Protein GI | 182414293 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.698113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.567778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TCATCGCCAT TATCAAGCCG TTCAAACTCG AGGAAGTGAA AGCGGCGCTG
GCCGAGATCA ACGTCGAAGG CATGACGGTG TCCGAGGTCA AAGGCTTCGG CCGGCAGAAG
GGGCACACCG AGATTTATCG GGGCAGCGAA TACACGGTGG ACTTTCTGCC GAAGGTGAAG
ATCGAGGTTG CGACCACCGA CGCGCAGGCG CCGCGGGCGG TGGAAGCGAT CATCAAATCG
GCCAAGACCG GGAAAATCGG CGACGGCAAA GTCTTCGTGC TCCCGGTCGA GGAGGTCATC
CGGATCCGCA CCGAGGAGAA GGGCGACGCT GCGATTTAG
|
|---|
| Protein sequence | MKLIIAIIKP FKLEEVKAAL AEINVEGMTV SEVKGFGRQK GHTEIYRGSE YTVDFLPKVK
IEVATTDAQA PRAVEAIIKS AKTGKIGDGK VFVLPVEEVI RIRTEEKGDA AI
|
|---|
| |