| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2431 |
|---|
| Symbol | |
|---|
| ID | 6207907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3128885 |
|---|
| End bp | 3129544 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641692090 |
|---|
| Product | phosphoadenylyl-sulfate reductase (thioredoxin) |
|---|
| Protein accession | YP_001819313 |
|---|
| Protein GI | 182414247 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCGA CCGAAATTCA CCACTGGAAC CTCGCGCTTC GCTCGCAGTC GCCGCTGGAA
ATCGTCCGCT GGGCCATCGC GAAAGCCAAC GGCCGCGCAA TCGTCTCAAC CAATTTTCGT
CCTTACGAAG CTGTCGTCCT CCACCTCGCC ACCCAGGTGC AGCCGGACAT TCCCGTCCTC
TGGGTCGACC ATGGCTACAA CCGCGCCGCC ACGTATCGCC ACGCCGAGCA GCTGCGGGCG
CAGCTTGGAC TCAACCTGAA AGCTTACCTG CCGCGGATCA GCCCCGCCCA TCGCGACGCA
ATTCACGGCG AGATCCCGAC GCCCGCCGAC GAGGACGCGC TCAAACAATT CAGCGCCGTC
ATGAAGCTCG AGCCGTTTCA ACGCGGCATG AAGGAACTCG CGCCTACCGT GTGGATCACC
GCGTTGCGCA AGGTGCAGAA TCCGAACCGC GCAGAGCTCG ACATCGTCTC GCCCGACGGA
AACTTCGGCA CGCTCAAGGT GAGTCCCGTC TTCCACTCGA GCGACGCGGA GATGGAGGCA
TATCTCACGA AGCACGGCCT GCCGAACGAG TGGGACTATT TCGATCCGGC GAAGGCCGAC
GAGAAGCGCG AGTGCGGTCT GCATGCATCG TGGGGCGCCC AAGCGGTGGC CACGGTATGA
|
|---|
| Protein sequence | MSPTEIHHWN LALRSQSPLE IVRWAIAKAN GRAIVSTNFR PYEAVVLHLA TQVQPDIPVL
WVDHGYNRAA TYRHAEQLRA QLGLNLKAYL PRISPAHRDA IHGEIPTPAD EDALKQFSAV
MKLEPFQRGM KELAPTVWIT ALRKVQNPNR AELDIVSPDG NFGTLKVSPV FHSSDAEMEA
YLTKHGLPNE WDYFDPAKAD EKRECGLHAS WGAQAVATV
|
|---|
| |