| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2417 |
|---|
| Symbol | |
|---|
| ID | 6208506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3111342 |
|---|
| End bp | 3111728 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692076 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819299 |
|---|
| Protein GI | 182414233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.439164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG AGCCGCCACG TCAGCTCAGC AAACTCGCCG AGGAGCTCGT CGGCGACTTG
CGCGGCTTGG GCTCGGCGGA GCCACGTCGC TCGGTCAAAC GCCCCACGCA GGACCTCAAG
TCGGTCGTGG AGCAGCTGGT CACCAAGTAT CACATCGGCC AGGAATCCGC GGAGCAGACG
ATCCGCGATC ACTGGGTCGA AATCGTCGGC GCCGCCAACG CCAGCTACTC GCATGCCGCG
AGCATTGAGC GCAACCGGCT GCTCGTCCTC ACCAGCCACT CGGTCGTGCG GAACGAGCTG
TTCCATCACC GCGAGCAGAT TGTGGAGCGA ATCCGCCAAC TGCCCGGCTG CGGCGGCGTC
AAGTCGTTGA ATTTGCGCGC GGGGTAG
|
|---|
| Protein sequence | MPEEPPRQLS KLAEELVGDL RGLGSAEPRR SVKRPTQDLK SVVEQLVTKY HIGQESAEQT
IRDHWVEIVG AANASYSHAA SIERNRLLVL TSHSVVRNEL FHHREQIVER IRQLPGCGGV
KSLNLRAG
|
|---|
| |