| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2415 |
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| Symbol | |
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| ID | 6207731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3108140 |
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| End bp | 3110332 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692074 |
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| Product | polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_001819297 |
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| Protein GI | 182414231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.556673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA AATACTCCGT CACGGTCCCC GAGTTGGGGA TCACGTTCTC CACCGGCTCC
ATCGCCCAGC TCGCCAACGG CGCCGTCAAT GTCCAGGTCG GCGAGACCAA CGTGTTTGTT
ACCGCCTGCG TCGCGCAGAC CACCAAGCCG GGCCAGGATT GGTTCCCGCT CACGGTCGAC
TACCGTGAAA AATACGCCGC CGCCGGCCGC TTCCCCGGTG GTTACTTCAA GCGCGAAGGC
CGTCCGTCGG AAAAGGAAAT CCTCACCTCC CGGCTCTGCG ACCGTCCGTG CCGCCCGCTC
TTCCCCGAGG GTTTCCTCAA TGAGGTCCAG ATCATCGGCC AGCTGTTCTC CGCCGATCTG
GTCAACGAAT CCGACATCTC GATGGTCAAC GGCGCCAGCG CCGCACTCGC CATCTCCGAT
ATTCCGTGGA ACGGCCCGAT CGCGGCCGTC CGCGTCGCCG AAATCGAAGG CAAGTTCGTC
GCCAACCCGA CCATCGACCA GATGTTCGCC TCGTCGCTCG ACCTGATCTA CGTCGGCAAC
GAAAAGGACA TGCTGATGAT CGAAGGCTCC GCGGACCAGA TCCCGGAAGA GCGCTTCATC
GAGGCGCTGG CGTTCGGCCA TGAGTCGATC CAGCCGATCC TCAAAGCCAT CAAGGAACTC
GTCGCCCAGT GCGGCAAGCC GAAGGGCACG TTCCCGCTCG TCGGCGCCAC GCCCGAGGCC
CGCACCATCA TCGAGCGCGT CGTCCCGACC GAGCGGCTGA TCGAAGCGAT CTTCGGCAAG
GAAAAGGCCG TCCGCGCCAA CGCCGTGAAG CTGCTCAAGG AAGAGGCCAA AGCGGCGCTC
ACCGCCGAAC TCGGCGAAGG CAAGTTCACC GACGTCGACT TGAACGTCGT GTTCGAGGAT
CTCCAATACA AGGCCTACCG CAAGACGGTG CTCGAACGCG GCGTCCGCGC CGACGGCCGC
GGCCAGAAGG ACATCCGTCC GCTGCAGGCG CAGGTCGGCG TGCTCCCGCG CGTGCACGGC
TCCGCCATGT TCCAGCGCGG TGACACGCAG AACATCGCGC TCACCACGCT CGGTCCCACC
AAGGATGCGC AGGATCTCGA CGCCCTCACC GGCGGCGTGA AGTCGAAGTC GTTCCTGCTC
CACTACAACT TTCCGCCGTT CTCCGTCGGC GAAACCGGCC GGTTCACCGG TCCGGGCCGT
CGCGAAATCG GCCACGGCGC ACTCGCCGAG CGTTCGCTCG TCCCGGTGCT ACCGCCCGAG
GATGTGTTCC CCTACTCGAT CCGCGTCGTG TCCGAGATCA TGGCCTCCAA CGGCTCGACC
TCGATGGCCT CGATCTGCGG CGGCTGTCTG TCGCTGATGG ACGCCGGCGT GCCGATCATC
GCGCCTGTCG CGGGCATCTC CTGCGGTCTG ATGACCCAGA ACGCTTCCGA CGGCTCGATC
GAGAAGTGGG TCACGATCAC CGATATTCTC GGTGAGGAAG ACCACTTCGG CGACATGGAC
TTCAAGCTCG CCGGCACCAG CAAGGGCATC ACCGGCTTCC AGCTCGACCT CAAGATCAAC
GGCCTGCCTT TCGAGATCGC GAAGACCGCC ATCATGCAGG CACGCGACGC CCGGATGGAA
ATCCTCAAGG TCATGCTCGG CTCGCTGCCC GCGCCGCGCG CCGATCTCAG CAAGTACGCC
CCGCGCATCC AAACGATCCA GATCGATCCG GAAAAGATCG GCCTGCTCAT CGGGCCCGGT
GGCAAGACGA TCCGCCGCAT CACCGAGACG ACCGGTGCGC AGATCGACAT CGCCGAGGAC
GACTCGGGCA AGGTGTTCGT TTACTCGAAC AACGCCGAGG CGATGAACCG CGCCATCCAG
GAGATCGACT CTCTCTGTGG CGGCGGCGGT CCTGGCGGCA GCAAGGGCCC CGCGATCGAG
GTCGGCAAGA TCTACACCGG CCGTGTGACC GGCGTGAAGG AGTTCGGCTG CTTCGTCGAG
TGCACCCCCG GCAACGAGGG CCTGTGCCAC GTGAGCGAGC TGGCCGACTT CCGTGTCCGT
CGCACTGAGG ACGTGGTGAA GATGGGCGAT TCGATCACGG TGAAGTGCAT CGGCATCGAC
GAGCGTTCCG GCAAGGTTCG CCTCAGCCGC AAGGCCGCGA TGAAGGAACT CGAAGCGCAG
AAGCAGAGCA GCGAAGCCGC TCCCGCGCAG TAA
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| Protein sequence | MNQKYSVTVP ELGITFSTGS IAQLANGAVN VQVGETNVFV TACVAQTTKP GQDWFPLTVD
YREKYAAAGR FPGGYFKREG RPSEKEILTS RLCDRPCRPL FPEGFLNEVQ IIGQLFSADL
VNESDISMVN GASAALAISD IPWNGPIAAV RVAEIEGKFV ANPTIDQMFA SSLDLIYVGN
EKDMLMIEGS ADQIPEERFI EALAFGHESI QPILKAIKEL VAQCGKPKGT FPLVGATPEA
RTIIERVVPT ERLIEAIFGK EKAVRANAVK LLKEEAKAAL TAELGEGKFT DVDLNVVFED
LQYKAYRKTV LERGVRADGR GQKDIRPLQA QVGVLPRVHG SAMFQRGDTQ NIALTTLGPT
KDAQDLDALT GGVKSKSFLL HYNFPPFSVG ETGRFTGPGR REIGHGALAE RSLVPVLPPE
DVFPYSIRVV SEIMASNGST SMASICGGCL SLMDAGVPII APVAGISCGL MTQNASDGSI
EKWVTITDIL GEEDHFGDMD FKLAGTSKGI TGFQLDLKIN GLPFEIAKTA IMQARDARME
ILKVMLGSLP APRADLSKYA PRIQTIQIDP EKIGLLIGPG GKTIRRITET TGAQIDIAED
DSGKVFVYSN NAEAMNRAIQ EIDSLCGGGG PGGSKGPAIE VGKIYTGRVT GVKEFGCFVE
CTPGNEGLCH VSELADFRVR RTEDVVKMGD SITVKCIGID ERSGKVRLSR KAAMKELEAQ
KQSSEAAPAQ
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