| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2327 |
|---|
| Symbol | |
|---|
| ID | 6206924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3014185 |
|---|
| End bp | 3016596 |
|---|
| Gene Length | 2412 bp |
|---|
| Protein Length | 803 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641691982 |
|---|
| Product | FG-GAP repeat-containing protein |
|---|
| Protein accession | YP_001819209 |
|---|
| Protein GI | 182414143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.50278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00347389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGCAG TGTTCCCTTT CCCCCACCCC CGCGCGGCCG ATTCGTCCGG CCGCCGCTGG
CGCGCGCACG CGTCGGCGCC TGCGCTCGTC TGCGCGCTCT TGTGCTCCAG CCTCACGACC
GCGCTGGCCG CGCCACCGGC GAACCCGGAG TTCTGCGCAC CGTCGTCCAC GCTGACTTCC
GCGCCGGCGG ATCTGACTGA GCAGCCGGCC AGCACCCAAC GCATGGCGGC TCGCCTGCGC
GAAATCGCGG AAGCGTCGAT TTCACCCGAG AGCCCATACG AATATCCCCG TCGCGCCGAA
GCGCTCCGGC AGATCATCGA GCGCACCTCG GATTCCGCTG AGCGCATCAA GTTCCTGCCG
ACCTACGCGC ACGATCTCCT GCGCGCCGGG GAACCCGAGC CCGCGCTGGC CGCGCTCGCG
ACGCTCGAAC AACTGCTGAC CGCCGAGGGC CACACCATGA CGCCCGTGCA GTTCACCACG
CTGCACACGA TCCGCGCGCT CGCTTATCTT CGCCTCGGTG AACAGGAGAA CTGCCTCTTG
AACCACAACG CCGACTCGTG CCTCTTTCCG ATTCGCGGCG GCGGCGTGCA TCCGCTGACC
CGCGGCTCGC GCGGCGCGGT GGACGCGCTG ACCACGCTGC TGACGCGTTA CCCCGGCGAC
CTGCGCGCCC GCTGGCTGCT CAATATCGCC CACATGACGC TCGGCGAATA TCCCGACGGC
GTCCCCGCCC AATGGCGGAT CGACCCGCAG CACTTCGCCT CTGCGCGCGA CCTGCCGCGG
TTTCCCGACG TCGCCGGTCG GCTCGGAATC GACGTCGACG ATCTCGCCGG TGGCGTGATC
ATGGACGACT TCGACCGCGA CGGCTTTCTC GATTTGATGG TTTCGGCCTG GGGTCCGTAC
AGCCAGCTCC GCACGTTTCG GAACAACGGC AACGGCACGT TCACCGAGCG CACGGCCGCC
GCCGGCCTCA CGGGAGAGAC AGGTGGGCTC AATCTCATCC AGGCCGACTA CAACAACGAC
GGTTTCGTCG ACGTGCTTGT TCTGCGCGGA GCCTGGCTCC GGCAGCTCGG CCACTACCCC
AACTCGCTCC TGCGGAACAA CGGCAACGGC ACGTTCACCG ACGTCACCGC AGAGGCCGGG
CTGCTGAGCT TTCACCCCAC CCAAACCGCC GCCTGGTTCG ACTTCGACGG CGACGGCCAC
CTCGACCTAT TCATCGGCAA CGAGTCCGCG CCGGACGACG TGCATCCGTG CGAACTCTTT
CGCAGCAACG GCGACGGCAC GTTCACGGAG TGCGCCGCCG CCAACGGCGT CGCTGCGGTC
GGTTACGTGA AAGGCGTCGT TACCGGCGAC TACAACAACG ACGGCCGGCC GGACCTTTAT
CTTTCGCGCC GCGATGGCGC GAATCTGCTC CTGCGCAACG ACGGTCCCGC CGATGCCGCC
TGCCCGCGCG GCACCTGGCG GTTCACCGAC ATGGCGCGCG AAGCCGGCGT GACCGAGCCG
TACGGGAGCT TCTCCTGCTG GTTCTGGGAC TACGACAACG ACGGCTGGCT CGACCTCATG
GTCACCGGCT ACGCGATTCA GGACGTCGGC GACATCGCAG CGGATTATCT AGGACTGCCT
CACCCCGGCG AATACGCGCG CCTCTATCGC AACCGCCGCG ACGGCACGTT CGCCGACGTC
ACGCGCGAAC AGGGACTCCA TCAGGTGCTC CACACGATGG GCTGCAACTT CGGTGATCTC
GACAACGACG GCTGGCTCGA TTTCTACGTC GGCACCGGCG ATCCGGATTT CGCCACGCTG
CTGCCCAACC GGATGTTTCG CAACGACGGT GGCCGCGGTT TTCAGGATGT GACGGCCAGC
GGCGGTTTCG GTCAGCTGCA GAAGGGGCAC GGCATCGCCT TTGGCGACAT CGACAATGAC
GGCGACGAGG ACATCTATTC CGTCGTCGGC GGCGCGGTGA ACGCCGACAA CTACCGCAAT
CAGCTCTTCG CCAACCCGGG ACTCGGAGGA CACTGGCTCA CGCTCACGCT CGAGGGCGTG
CGCTCGAACC GGCTCGCCCT CGGCACGCGG ATCAAGGTCG TCGTCGCGAC TCCGGCCGGC
GAACGCGAGA TCCACCGCGC GGTCGGCAGT GGCGGCAGCT TCGGCGCGTC GCCGCTGCAG
CAGCACATCG GGCTCGGCGA CGCGTCCCGT ATTCTGCGCG TCGAGATCTT CTGGCCTGCG
ACTGGCCAAA TCCAGCGGCT GGAAAATCTC GCGCTCGACC GATCCTACCT CGTTCGCGAA
GACGCCGCTG CCGCGATTGC GGTCGAGGTC CGCTCGTTCC GCCTCCCCAC GGATCCGAGC
CCGGATCATC CGTCGCACCA GCATGCGTCG GCACCGCCGG TGCCCACACC GCATTTCGCG
ACCAGCCGCT GA
|
|---|
| Protein sequence | MRAVFPFPHP RAADSSGRRW RAHASAPALV CALLCSSLTT ALAAPPANPE FCAPSSTLTS
APADLTEQPA STQRMAARLR EIAEASISPE SPYEYPRRAE ALRQIIERTS DSAERIKFLP
TYAHDLLRAG EPEPALAALA TLEQLLTAEG HTMTPVQFTT LHTIRALAYL RLGEQENCLL
NHNADSCLFP IRGGGVHPLT RGSRGAVDAL TTLLTRYPGD LRARWLLNIA HMTLGEYPDG
VPAQWRIDPQ HFASARDLPR FPDVAGRLGI DVDDLAGGVI MDDFDRDGFL DLMVSAWGPY
SQLRTFRNNG NGTFTERTAA AGLTGETGGL NLIQADYNND GFVDVLVLRG AWLRQLGHYP
NSLLRNNGNG TFTDVTAEAG LLSFHPTQTA AWFDFDGDGH LDLFIGNESA PDDVHPCELF
RSNGDGTFTE CAAANGVAAV GYVKGVVTGD YNNDGRPDLY LSRRDGANLL LRNDGPADAA
CPRGTWRFTD MAREAGVTEP YGSFSCWFWD YDNDGWLDLM VTGYAIQDVG DIAADYLGLP
HPGEYARLYR NRRDGTFADV TREQGLHQVL HTMGCNFGDL DNDGWLDFYV GTGDPDFATL
LPNRMFRNDG GRGFQDVTAS GGFGQLQKGH GIAFGDIDND GDEDIYSVVG GAVNADNYRN
QLFANPGLGG HWLTLTLEGV RSNRLALGTR IKVVVATPAG EREIHRAVGS GGSFGASPLQ
QHIGLGDASR ILRVEIFWPA TGQIQRLENL ALDRSYLVRE DAAAAIAVEV RSFRLPTDPS
PDHPSHQHAS APPVPTPHFA TSR
|
|---|
| |