| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2321 |
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| Symbol | |
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| ID | 6206649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3002977 |
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| End bp | 3004404 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691976 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001819203 |
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| Protein GI | 182414137 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.084712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00212856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACGGGCC GGCGCAGGCT CCTCGTGACG CTGGGCGTGC TCGGGTTGCT CGGCCTCGCG
CTGGCAGGCT GGCGGCTGTG GGCCGCGCAC GCGGCGGTGG CCGGCGGGGT TCCGCCGGTG
CCGGAGCTGG CGCAGGGGGC GGACGAATTG CAGCAACGCG TGAGGCGCGC CGACGCGGGG
GCCCGCGGTT ATCTGCACCC GCAACGATCG CTCGCGGAGC TGGCGCGGCT TTGTCACGCG
AACGGTTTTT TTGACGAGGC GATTCTGTGC TACGAGACCC TGCAACGCCT GCAGCCGGAC
GAAGCGCGCT GGCCGCACCT GCACGCCGCG ATCCTGGCGA CGAACGGGCA ACTCGATGAG
GCGGCGCCGC TGTATCGGCG TTCGGCGGAG CTGGCGCCAG ATTATCTCCC CGCGCGACTG
CGGCTTGGCG ACGTGCTGCT GAAGGCGAAT CGCCTGAGCG AGGCCGAGCA GGCCTATCGC
GGGGTGTTGC AGAAGCTGGC CAGTGAACCC TACGCGATGC TCGGGCTGGC GCGTTGCGCG
ATCGCGCGCG ACGACTGGGA ATCCGCACGG CAGCAGTTGC AGGGGTGCAT CGCGGCGAAC
CCGGAGTTCG TCGGCGGGCT ATCGCTGATG GCCACCGTGC ACGAACATTT CGGCGAGCCC
GACGAGGCGA ACCGGATCCG TGAACACGTG AACAAACGGG AGTTCGTCGA TCTGCTCGAT
CCCTGGGTCG AGGCGCTGCT GGAAGATTGT TATGATCATT ACCGGCTGAG CGTGGCGGCG
GCGGTGGCCG GGTTCCGCGG AGACCACGCG AGCGCGGAGC GCTGGCTGCT TCGTGCGATC
GAGCTGTCGC CAAAACCGGC GGCGTATTAC CGGCAACTCG GAAAATTCTA TACGCGCACC
GAAAACATGT CGGCGGCGCG ACGGGCGTTC GAGCACGCGA CCGCGTTGGC CCCGGAAGAC
TCCGACGCGT GGGCGCTGCT GGTCAATCTG CTGAAGTCGG CGGGCGAGCG GCCGGCGGCG
TATTCCGCGC TCGACCGCGG ATTGAGGAAC CGGCCCGACT CGCGCGCGCT GCATCACGCG
CTGGGCCAGA TGCTGGCGGA GGACGGACGT TACGCGCCGG CGATCGCCGA ATTCCAGCGC
GCGAAGCAGC TGCAGCCGAC CGAGGTGAGC GCCTACGTCG AGATCGCGCT GGTGCATTTC
CGGCTGGGGG AAATCGAAGC GGGGATGGAC GAGATGCGTG CGGCGTTGGC CGTGCAACCG
GATCACCCGG TCGCGTTGGT GATGCTGGGT CGCGACGCGA TTGCGCGGGG AGAGGAAGCG
CAGGCTCGTG AGTGGATTCG CCGCGCGCGG CTGCAGAGCC GCGTCCGACC GGAGGACCTC
AACGCAATGC TGGCCGAGTT TCAGCAGAAG TTTGGGCGGC TGCCGTAG
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| Protein sequence | MTGRRRLLVT LGVLGLLGLA LAGWRLWAAH AAVAGGVPPV PELAQGADEL QQRVRRADAG
ARGYLHPQRS LAELARLCHA NGFFDEAILC YETLQRLQPD EARWPHLHAA ILATNGQLDE
AAPLYRRSAE LAPDYLPARL RLGDVLLKAN RLSEAEQAYR GVLQKLASEP YAMLGLARCA
IARDDWESAR QQLQGCIAAN PEFVGGLSLM ATVHEHFGEP DEANRIREHV NKREFVDLLD
PWVEALLEDC YDHYRLSVAA AVAGFRGDHA SAERWLLRAI ELSPKPAAYY RQLGKFYTRT
ENMSAARRAF EHATALAPED SDAWALLVNL LKSAGERPAA YSALDRGLRN RPDSRALHHA
LGQMLAEDGR YAPAIAEFQR AKQLQPTEVS AYVEIALVHF RLGEIEAGMD EMRAALAVQP
DHPVALVMLG RDAIARGEEA QAREWIRRAR LQSRVRPEDL NAMLAEFQQK FGRLP
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