| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2275 |
|---|
| Symbol | |
|---|
| ID | 6208792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2931962 |
|---|
| End bp | 2933776 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691930 |
|---|
| Product | FG-GAP repeat-containing protein |
|---|
| Protein accession | YP_001819157 |
|---|
| Protein GI | 182414091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.645045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGC GCCGTTCTCG CCTCTCGCCG CGCCAGCGGA AGCTGTGGCT TTCCTCGATC
GTGATCGTGC TCGGCACCCT GGTGCTCGGC GCGCTCGTGT ATTGGTGGGA GTGGGCGCGC
AACACCGATC GAGCCGACGC GCGCGGCAGT GTTTCCGCGG CCTTCGTGCA GTCGGCCCTC
GCGGAGAGCA CGCCGGTCCG GTTCACCAAC GTTACCGCGG CGAGCGGAAT CACCTTCCGC
CACGGCGCGC CTGCGCGACA CCGCGCGCTG CCCGAAGACA ACGGTTCCGG ACTCGCGTGG
GGCGACTTCG ACGGCGACGG CCAGCTGGAC CTCTACCTCG TCAACCACCC GGGGATCGTG
CCAACGCCAG GCTGGACCTC CCCCGGCAAC CGGCTCTTTC GCAATCTCGG CAACGGCACG
TTCGCCGACG TCACTGACCG CGCGGGGGTC GCGGATCGCG AAGGATTCGG GATGGGCGCC
ACGTTCGTCG ACTACGACGC CGACGGTGAT CTCGATCTCT ACATCACGAA CCGCGGATCA
AATCGGCTGT TTCAAAACCA GGGCGACGGA ACCTTCGTCG ACGTCGCCGC GCGCGCCGGC
GTCGACGATC CGCTCTGGGG CACGGGCACG GCGTGGGGCG ACTTCGATCG CGACGGGCAC
ATCGACTTTT ATCTGTGCAA CTACGTGGCC TACGATTCGG CCGGCCGCGA ACCGCCGGCG
TCGGCGGCGA CCGGCGGTGC CGACTACGAG GCGCCCTACA CGCTTAATCC AAACTCCTAC
GACCCGCAGC CAAACCGGCT GTTTCGAAAC CGCGGTGACG GCACGTTCGA GGACGTCACC
GCCCGCGCCG GCGTGGCCGA TCCCGACGGG CGGAGCCTCG CGGCGAGTTT CGTCGATCTC
GATGGTGACG GCTGGCTCGA CCTCTACGTC AACAACGACG TTTCGCCGAA CCGGCTGTTC
CGGAACACCG GTGGCGATTT CGGCTCCGAC CACCCCGTCG CCTTCCTCGA CCTCTCGACC
GTCACCGGCA CCGCCGATCC GCGGGGGTCG ATGGGCCTCT CCATCGCGGA GCTCGGCGAC
CTCGACGGCC ACGCCGATGG CCTGCCCGAC CTGTTCATCA CGCATTGGGT CGCGCAGGAA
AACGCGCTTT ATCAAAGTTT CCCCACGCCG GCCGGCGTGG TCGAGTATCG CGACAAATCG
CGGCCGTATC AGCTCGGCGA AATCTCGATC GACCGCGTCG GCTGGGGCTG CGCGTTCGCC
GACTTGGATC TCGACGGCCA GGTGGACATC GCGGTCGCCG ACGGCAGCAC GCTCGAACGC
AACGCCGATC CGCTGCTGCT CAAGCCCGAG CCGCTGTTTC TTTTCATGAA CGACGGCCGC
GGTTTTCGCG ACGTGGCTGC GCTCGCCGGC GATGCGACGG CGCGATCCTA CAACGCCCGC
GGATTGGCGG CAGCGGATTT CGACGGTGAC GGCGACATCG ATCTCGCGGT CTCCACGAAT
CAGGGCGAGG TGCTTCTGCT CCGGAACGAC ACGCCGACGC AGAACCGGTC ATTGACCGTT
CAGTTGAAGG GGCCGGCCGC GGCGTGCTTT GGCGCAAAAA TCGAAGTGCG CGCCGCCGGC
CGCACGCAGA TCCGTTGGTG GGGCGCTGAT GTGTCCTACC TCAGCCAGCA CGGCGCCGAC
GTGATCTTCG GACTCGGCTC CGCCACCGAT GCCGAATTCG TCCGCGTGCG CTGGGCCGAC
GGCCGCAGTT CCATCGCCCG AGATGTCCCT GCCGGCCGCG CGCAGCTGGA GCACGCGGCC
AGCTCGTCGC CGTAG
|
|---|
| Protein sequence | MPPRRSRLSP RQRKLWLSSI VIVLGTLVLG ALVYWWEWAR NTDRADARGS VSAAFVQSAL
AESTPVRFTN VTAASGITFR HGAPARHRAL PEDNGSGLAW GDFDGDGQLD LYLVNHPGIV
PTPGWTSPGN RLFRNLGNGT FADVTDRAGV ADREGFGMGA TFVDYDADGD LDLYITNRGS
NRLFQNQGDG TFVDVAARAG VDDPLWGTGT AWGDFDRDGH IDFYLCNYVA YDSAGREPPA
SAATGGADYE APYTLNPNSY DPQPNRLFRN RGDGTFEDVT ARAGVADPDG RSLAASFVDL
DGDGWLDLYV NNDVSPNRLF RNTGGDFGSD HPVAFLDLST VTGTADPRGS MGLSIAELGD
LDGHADGLPD LFITHWVAQE NALYQSFPTP AGVVEYRDKS RPYQLGEISI DRVGWGCAFA
DLDLDGQVDI AVADGSTLER NADPLLLKPE PLFLFMNDGR GFRDVAALAG DATARSYNAR
GLAAADFDGD GDIDLAVSTN QGEVLLLRND TPTQNRSLTV QLKGPAAACF GAKIEVRAAG
RTQIRWWGAD VSYLSQHGAD VIFGLGSATD AEFVRVRWAD GRSSIARDVP AGRAQLEHAA
SSSP
|
|---|
| |