Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2256 |
Symbol | |
ID | 6205922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2905047 |
End bp | 2908598 |
Gene Length | 3552 bp |
Protein Length | 1183 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641691912 |
Product | immunoglobulin I-set domain-containing protein |
Protein accession | YP_001819139 |
Protein GI | 182414073 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02608] delta-60 repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0104124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC GGGCTTTCGC CATTCTTCCC AGATCACTCG TCAGCATCTG TGTGGTGTGC CTGGTCGCGT CCAATATCAG AGCCGCAGTC GCGCCGGATA CGCTGGCGCT GGATCCTGCT TTCGCACCTG TGCTCGAATC GACGGCCGGT CGCACCAAAT CGGTGATCTC CCAACCCGAC GGGAAACTCA TCGTGGCCGG CTCATTCACT CGGATCAACG GAGTCTCGCG AAATAATCTC GCTCGGCTGA TGAAAGACGG CGCGGTTGAT CCGACGTTCT CTCCCGGCAT TGGTCCGAAT GGCGAAATTT CGATGACGGC TCTCCAGCCC GATGGACACG TGATCGTCGT TGGCGGCTTT ACCGCGTTCG GAACAGCCGC TCGAAACGGA ATCGCGCGAA TAAACCTGGA CGGGAGTCTC GACACTTCGT TTGTGCCAGC AAAACTGACC AACTCCCGCG ACGAAACGTT GATGGATGGA GTCGTTGCTG TACAGAGCGA CGGGCGGATT CTGGTCGGCC GCAAACAGGT ATGGTCAGGA TCCGGATCCA TGGTCCGACT TGCTCCAGAC GGCAGCCTCG ATGCCGCGTT CTCTCGAAAC GCGGCCGACA CGCCGGTGCA TGCAATTCGT GTTCTTTCCT CCGGCAAGAT ACTCGTGGCC GGAAGATTTG ATTCGTATAA CGGCACCCCC TGCAAAGGTA TCGTTCGACT GAATGCCGAT GGCACCGTCG ACCCCGGCTT TGCCAACTCA CTTCCCGCGG GTTTTTATCC GGTTGCGATG GACGTTTGTC CGGACGGAAC CGTCGTGCTC GGAGCGGAGC GTTCCTCCAC TAACCTGATC CGCCTCGCCT TGGACGGCTC GGTGGACCAA CAGTTCGAGC CGTGGGGAGG CTCTGATCGT TTCGTGACGT CGCTGGCCGT GCAGCCCGAT GGCCGGATCA TCGCGGCCGG TTCCTTCGGG GTTGTCGACG GTGTCGAGCA GCGAGTCGTG CGGCTATCGA CCAAAGGAGC CCGTGATCCG AGTTGGGAAG CACCCGACGC TCCTCAGGAG CCTCTAGCGA TCCTTCTGCT GAAGGACAAC CGCGTTCTCG TCGGGGGCTC GTCCGGCATG GTCGACGGCG TTCCGCGGTC GGGCCTGCAG CGCTTGCACG CCGACGGCAG CCACGATGCC ACGTTTAGTG CGCAAGTGAG GGCCGCCGGG ATAGTCCATG CCATGGTCCC ACGGACCGAT GGGAAGATTG CGATCGGTGG CCAGTTCAAT TTCGTCAATG GTGCGCCTTC TGAAGGGCTG GCATTGCTAA ACGCCGACGG CACAACCGCT GATGGATTTA GCGCGTCCGT GAGCCTCGTA AATGTGCCTT TGTATTCGGC CGCTGTCAGA GCTCTCGCTC TGCAACCTGA TGGCCGGCTG CTTGTAGGCG GCAATTTCAA TAGAGTTAAT GGCGAGCCAC ACAGCTATAT CACACGTCTC CAGTCCGGTG GTTCGATCGA TCCGACGTTC TCTACGGGTG TGGGTCCGAA CGGGCCTGTG AACGGGATCT CTGTCCAGCC GGACGGCCAG ATCGTCTTGG GTGGAAATTT CTCCGAGTTT AGCGGCGTAT TTCGCTCTGC AATCGCGCGC ATCAGCGGGA CGGGCGCCTT GGATCCGTCA TTTACGCCCG GAACGTCGGG CTCGGTGAAC ACAATGCTGT TGGATTCGAG CAACAGGATA TTTGTGGGTT CGTTCAACGG ATTGAAATGT ATTCTTCCCG ACGGGAGGTC AGGCGATACC GGCCTGGTGC AGCCGATTGA CTCCGGAAGC TTTGTCAGCG CGATCGCCCA GGGATCGGAC CGAAAGATTT ATGTGGAGGG CCTCATCGAT CTGAATATCT GGGCCGATGG CGTCATGGAT CTGAGCGGCG AGAAGCGCAA TTTGGGCCTC GTCCGACTAA GCTCAGACGG GAAGGTGGAC GGCAGTTTCG CACGAATCCC TGCGTCGCGC ATCGGCGGTA TCGGTGCGCT GTGTCTTCAG AGCGATGGCA GCATAATCGC AGGTCGCGCC TACAATATTG GTGGGTGGAA TACGAGCACG ACCGGAATCG CACGGTTTTC CAGCGCTGGC TCGCTTGACT CAAGTTTTCG AGTGCTGGAT CTGGAGGATC CTGGGTTCAC CAGCATGGCG CTGCTCCAGG ATGGCAGGAT ACTCGCGTCC GGGAGCCGTT TTCACGACAA GATCACCGAC CAGCGCGGAC TGGCGAGATT CGCTGCTCCC AGCCGCCCTT CGCTCACCTC GCCCACCACT GCCGTATTCG TCGCCGGCGT GGAAACTTCC CTTCAACTGA CGGCGACCGG CTGCCCCGCA CCGACGATCG AACTGGTATC GGGTACGCTA CCTTCCTGGG CGGCATGGCA CCCGGATTCC GGCGTAATCT CCGGAACGGC GCTCGCTGGT GCGCCCGAGA CGCTGCTGGT GTTCCGGGCG GTCAACGTAG CAGGGCAGTC CTCCCCACGG GATCTACGAC TCAACGTGCA GGCCCGACCC AGGTTCACTC GACAGCCACA GGGGGCGGCG ATCCCAGTCG GCGGGAGCGT TACCCTGAGT GCGCAGGGGG ACGGCACGCC AGTCCCCTCG TTCCAGTGGC GGAGAAACGG GGTCGACCTG CCAGGCCAGG TCGCCGCCTC GCTTACGCTT GCCGATATGC AGCCCGCCCT GGCGGGCGTG TACACGGTCG TACTGTCGAA TTCTGTCGCA TCCACCGAAA GTAATCCCGC GGTCGTGGGA GTCGATACGG CTGCAAAAGT GGTCGGGGCA GCCACCGAGG TAGGCCACGA TATCCCGCAT TCGAACGGCA ATGTTTACGA CCAGGTGCTG CTGGCAGGCG AGGCGGCAAC GATCACGGCT GATCCTGGAC AGATAACGCG TTTGTCCTAT CTCGATCTGA CGGATGACAT CGTGCAGGTT GAGTTCTCGG GCGCCGGCTC CCTGACGATT ACCCTCGAAA CTCCGACTGG GCCGGCCCGG CCGGTGAAGT ACAACCAGGA TGTCGAATAT GTGAAGGGGC ACGCCTCCCT GGTTCTGGTC GGGGCGGACG AAACGACCAA CGTCGGCGCG TTCAGCGTTG GGCGAATCAC CGCTTCGAAC CCAACGCTGT TCCGAGACGA CGTCAGCTAC GATGGATATG TCGATCTCCG CTCAATTGCC ATCGCCAGTT CGGACGGAAA GTTCGGCGGT GTACGTACGG CGAACGTCGT ATACTCAGCG GAACAAGGCA CAGTCGGGAT ACAGGCGATG GGCACCAGCT TCACCGGCCC GGTGTATGTG GCCGACCTGC AAGGTTCCGG GTCAGCCGAG GTCGTCCTGC TCATCGGTTC AGCGACTACA ATCGCCGTCA CGGGCGGAGA CCTGTTTCAG AGCAACGCCC AGGTAATTAG GACCGATGGC ATCGACGAAC TGCAGTTTTG GCCGGGCAGC AGTTCACACG GCGTCCTCGC ACCGGCGCAG CGCAATCGAG CACAACTGCT CCAAGACGGC ATCGACATAA CCGATCTGAT CGTAGTCCCA CCCAGCCAGT AG
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Protein sequence | MNIRAFAILP RSLVSICVVC LVASNIRAAV APDTLALDPA FAPVLESTAG RTKSVISQPD GKLIVAGSFT RINGVSRNNL ARLMKDGAVD PTFSPGIGPN GEISMTALQP DGHVIVVGGF TAFGTAARNG IARINLDGSL DTSFVPAKLT NSRDETLMDG VVAVQSDGRI LVGRKQVWSG SGSMVRLAPD GSLDAAFSRN AADTPVHAIR VLSSGKILVA GRFDSYNGTP CKGIVRLNAD GTVDPGFANS LPAGFYPVAM DVCPDGTVVL GAERSSTNLI RLALDGSVDQ QFEPWGGSDR FVTSLAVQPD GRIIAAGSFG VVDGVEQRVV RLSTKGARDP SWEAPDAPQE PLAILLLKDN RVLVGGSSGM VDGVPRSGLQ RLHADGSHDA TFSAQVRAAG IVHAMVPRTD GKIAIGGQFN FVNGAPSEGL ALLNADGTTA DGFSASVSLV NVPLYSAAVR ALALQPDGRL LVGGNFNRVN GEPHSYITRL QSGGSIDPTF STGVGPNGPV NGISVQPDGQ IVLGGNFSEF SGVFRSAIAR ISGTGALDPS FTPGTSGSVN TMLLDSSNRI FVGSFNGLKC ILPDGRSGDT GLVQPIDSGS FVSAIAQGSD RKIYVEGLID LNIWADGVMD LSGEKRNLGL VRLSSDGKVD GSFARIPASR IGGIGALCLQ SDGSIIAGRA YNIGGWNTST TGIARFSSAG SLDSSFRVLD LEDPGFTSMA LLQDGRILAS GSRFHDKITD QRGLARFAAP SRPSLTSPTT AVFVAGVETS LQLTATGCPA PTIELVSGTL PSWAAWHPDS GVISGTALAG APETLLVFRA VNVAGQSSPR DLRLNVQARP RFTRQPQGAA IPVGGSVTLS AQGDGTPVPS FQWRRNGVDL PGQVAASLTL ADMQPALAGV YTVVLSNSVA STESNPAVVG VDTAAKVVGA ATEVGHDIPH SNGNVYDQVL LAGEAATITA DPGQITRLSY LDLTDDIVQV EFSGAGSLTI TLETPTGPAR PVKYNQDVEY VKGHASLVLV GADETTNVGA FSVGRITASN PTLFRDDVSY DGYVDLRSIA IASSDGKFGG VRTANVVYSA EQGTVGIQAM GTSFTGPVYV ADLQGSGSAE VVLLIGSATT IAVTGGDLFQ SNAQVIRTDG IDELQFWPGS SSHGVLAPAQ RNRAQLLQDG IDITDLIVVP PSQ
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