| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2248 |
|---|
| Symbol | |
|---|
| ID | 6206300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2895389 |
|---|
| End bp | 2896420 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641691904 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819131 |
|---|
| Protein GI | 182414065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0486494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCG ACGCAACCCA GCACAACATC GCGTGGTTCA AAGATCAGCA CGCAGCCGAC
AAGCTCAACC TTTCCCCCGA TTTTCAGCGG AACCACGTGT GGCTCGAGGA TGAAGCATCC
TACTTAGTCG ACACGATTCT GCACGAGCTG CCGTTCCCTG AAATCTACAT TCGAAATATT
GTTGATGAAG ACGGTGGTTC GAAATTCGAG GTGGTCGATG GGCAACAGCG GATTCGAACA
ATTTTGGGCT TTGCCGCGGG CGATTTTCCG CTTCAGGGAG ATGACGTGAG CCCAAAATTT
TTGGGCAAGA CGTTCAAACA GCTCACTCCA GAGCAAAGGA CAAAATATTG GGCCTATAAA
ATCGTCGTCC GTGAACTCGG CTCCGCTAAC GATGCGGAAA TCCGCGATCT CTTTCGACGG
CTTAATAAGC ACGCTGTTAC ATTAAACGAC CAAGAACTCC GTCACGCCCA TTTCAAAGGG
AAATTCATCA AGCTGATGGA GAATATCGCA GACGACGAAT GGTGGTCTGA GAATAAAATT
GTCACGACTA GGCAGATTCG ACGTATGGAG GACATCGAAT TCGTCAGCGA ACTTTTCATC
GGTGTAGTGT CAGGTCCGCA GAACAAGAAG GACACGATTG ATGATTATTA TGAACAATAC
GAAAAGGACT TTCCTGAGAA GGAAGAGCAC ACTAAGCTCT TTCGAGACAC AAAAGCATTA
ATCGAAGATG TGTTGCCGCA CGAGGAACTT CGCAGATGGA GCGGAAAAAG CGACTTCTAC
TCGTTGTTCC TCGCATTCTC TCACTTTGCA GCAGAGACGA TAACGGGGAG CAGGAAGAAG
AGATTACTGG AAGCGCTTTC GGGTTTTCGC GATGACGTGG ACAGAACGAA AAAGAAGGAC
GCCAAGCCGT CGAAGTCCGA CCACGTGAAT GACTACGTCG AGGCGGTAAC GCGCGCTGCA
AGCGACATCG ACCGCCGTCG AACCCGAATT AGAATTGTCT CTGGCCTCAT CAGGCGTGCG
GTAAAAGGGT GA
|
|---|
| Protein sequence | MQPDATQHNI AWFKDQHAAD KLNLSPDFQR NHVWLEDEAS YLVDTILHEL PFPEIYIRNI
VDEDGGSKFE VVDGQQRIRT ILGFAAGDFP LQGDDVSPKF LGKTFKQLTP EQRTKYWAYK
IVVRELGSAN DAEIRDLFRR LNKHAVTLND QELRHAHFKG KFIKLMENIA DDEWWSENKI
VTTRQIRRME DIEFVSELFI GVVSGPQNKK DTIDDYYEQY EKDFPEKEEH TKLFRDTKAL
IEDVLPHEEL RRWSGKSDFY SLFLAFSHFA AETITGSRKK RLLEALSGFR DDVDRTKKKD
AKPSKSDHVN DYVEAVTRAA SDIDRRRTRI RIVSGLIRRA VKG
|
|---|
| |