| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2244 |
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| Symbol | |
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| ID | 6205754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2890360 |
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| End bp | 2891859 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691899 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001819127 |
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| Protein GI | 182414061 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0619651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ATGCCTCCCT GCTTCATGCT TTCGCGACCA AGCGGGACGA AGCCGCCTTC
CGGCAACTCG TCGGGCAGCG GATCGGATTC GTTTACGCCG TCGCTCTTCG GCGGCTGAAC
GATCCGCACC TCGCGCAGGA AGCCACGCAG TCGGTGTTCA TCGCGCTCGC CCGCAAGGCG
GCGAGAGTCG CGCAGAACCC AAGCGTAATG GGCTGGTTGC ACCGCTGCTG TTGTTACGAA
ACCCACAACC TCATGCGCGC GCAAATCAAC CGGGCCGCCC GCGAACAGGA AGCTCACCAG
CGCGGCACGA CAACCGCGCC TTCGCCGTCC GGTCACCGGT GGGAAGAAAT CGAGACGGTG
CTCGACGACG CGTTGAGCGA ACTGGCGGAG CCGGATCGCT CCGCCATTCT CGCCCGCTAT
TTTTCGAATC AGTCGTTCGC CGAGATCGGA ACCGCCAGCG GCCGCACGGA AAACGCGGCG
CGGATGCGGG TGGAACGCGC TTTGTCCAAG CTCCGCGAAC AGCTCCAGCG CCGTGGCTTC
GACTCCACGG CCGCGGTCCT CGCAGGCCTG CTGCCCTCCT CGGCCAGCGC GCTGGTGCCG
AGCGGCTTGT CCACCACGAT CGCGGACGCG GCTTTGAGCA CCGTCGGCAC CACTTCTCTC
CTCGCAGTTT TTGTCGCCAC CATGAGCACG ACCAAAATCA CCGCCACCCT CGCCGCCGTC
GCCGGCTTGG GCATCATCGG CTATCAGATC CACCAGACAA ACGTCCTCGC CGGCGAACTC
GGTTCCCTTC GCGCCGAACA CGCCCGTGCC ACCGAAACGG TCCGCGCTCT CGAGAATCAA
ATCCGTGAGC TGAAAACGGC CCCGGCCAGC ACCACCGCGG TAGGCACCGC AACCGCCGCA
ACGGCGACGA CGGCGGTCGC GGCGAAAGCG GAGCCCGTTG AGGTGCCCGG CATCACTCGC
CAAGCCCCGC CCGGCTGGTT CAAGAATGGC AACAACACCA AGGGCTATGA CGTCGGCGTC
GACCAGACGC AGCCGTGGGG CGGAATGCCC AGCGCCTACG TGAAATCCAA CGACCTCTCC
ACTGCCGAGG GATTCGGCGG AATGATGCAG GTGACAGCCG CCGACGTTTA TCGGGGGCAA
CGCGTTCGGC TCAGTGGCTG GATGAAGACC CAGGATGTCC AAGATGAAGG CGCCCATCTC
TGGCTGCGCG TGGACGGCAA AGGGCGTGGG AATATTCTGG CTTTCGATAA TATGCGCAAC
CGGGCTCCGA AAGGCACCAC CGACTGGCAA GAGTATTCCA TCGTCCTCGA CGTGCCTCGT
GATGCTGAAG CGATCAACTA TGGAATGTTT CTGGCGGGCC GCGGGCAGAT CTGGGTCAAC
GCGCTGACCG TCACGGCGGT GGGAGCAGAG ACGCCCATCA CCAATCCACA ATCCTTGCCC
AAACCACCCA ATGCGCCGGT GAATCTGGGG TTCAATCCAG ATTCCACTCC CAAAACCTAA
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| Protein sequence | MNDDASLLHA FATKRDEAAF RQLVGQRIGF VYAVALRRLN DPHLAQEATQ SVFIALARKA
ARVAQNPSVM GWLHRCCCYE THNLMRAQIN RAAREQEAHQ RGTTTAPSPS GHRWEEIETV
LDDALSELAE PDRSAILARY FSNQSFAEIG TASGRTENAA RMRVERALSK LREQLQRRGF
DSTAAVLAGL LPSSASALVP SGLSTTIADA ALSTVGTTSL LAVFVATMST TKITATLAAV
AGLGIIGYQI HQTNVLAGEL GSLRAEHARA TETVRALENQ IRELKTAPAS TTAVGTATAA
TATTAVAAKA EPVEVPGITR QAPPGWFKNG NNTKGYDVGV DQTQPWGGMP SAYVKSNDLS
TAEGFGGMMQ VTAADVYRGQ RVRLSGWMKT QDVQDEGAHL WLRVDGKGRG NILAFDNMRN
RAPKGTTDWQ EYSIVLDVPR DAEAINYGMF LAGRGQIWVN ALTVTAVGAE TPITNPQSLP
KPPNAPVNLG FNPDSTPKT
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