| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2242 |
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| Symbol | |
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| ID | 6208027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2886340 |
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| End bp | 2889192 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691897 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001819125 |
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| Protein GI | 182414059 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0827659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAA ACTCACCACG CACGTCCCGG AGTTTTCCTG CTCAAAAAAG GAAAACCGCC
GGTAACGCTC TCGCTGTCCT GTTGGTGCTC GCCGCCGGCG TGACCCTGGG CCAAGCCCAG
CCCACTGCGC CCGCCGCGAC CCCGACCGAC GACAACGTCG TCCAGCTCGA CACCTATGTC
GTCTCCGGCT TCCGCAGCAG CTTGACGGCG GCATTGGACA TCAAACGCGA GTCCGTCCAA
ATCGTCGACT CGATCGTCTC GGAAGACATC GGCAAGTTCC CGGACAACAA CCTGGTCGAG
TCGATGCAGC GCATGACCGG CATTCAGGTC ACCAATCGCG GCGCCGGCGA AATCGGCACC
GTCTCGATCC GCGGCTTGAA TGACATCAAC ACGACGCTGA ACGGCCAGAA TATGTTCATC
TCGTCCGGTC AGGCGATGGC CTTGCAGGAC ATCCCGACCA CGCTGCTGGC CCGCGTCGAC
GTCTACAAAA CCCGCTCGTC GGACCTGATC GAAAACGGCA TCGCCGGCTC GGTCGACGTA
CGCACGCACC GGCCCTTCGA CTTCGAAGGC CGCCGTGTGG CGCTCGCCGC CCGCGGGATC
TACCAGGAAC AGCGCGACAA GATCGGGCCG AACTACAGCG CGCTCTTCAG CAACCGCTGG
AAAACCGCCA ACGGCGGCGA GGTCGGCGCG CTGGTCAATA TCTCGTACGC CGAGACGCCT
TATCGCGACC AAAACGTCAC GGCCGGCGCG CAGGTGCCGT TCGTCACGGG CGCGGGCGCG
GTGACCGGCG GCGTCACGTG GGTGCCGTGG GAACGCATCT TCCCCACCCG CGGCGGCGTG
GCGGAGAATC CCATCTGGCA GGCGGGCCTC GACAGCGGTC TGCCGACCGC CCCGAACTCC
ACGCTGCAGA TCAACGGCGT GGCGGTGCCC TACGTCCTGG CGCGCGACGC GGTCTTCCAA
AACGACTTCA CCGGCACGCG CAAGCGGCCC GCCGTCAACA TCGCGCTCCA GTGGGCGCCC
TCGAAGGACG CGGAATACAC GTTCGAATCG TTCTACTTCG GCTACGACAA CACCTCGTTC
AACAACCTGT TCTTCTCGTT CGTCGATTGG TGGGGTGGCC CGCATGGTCC GGTCGAACTC
TATCCCGGCA CGAACATCGT GCAGTCCCGC GCGTGGACGC CGTTTGTCTA CGGCTTCACC
AGCGGTGATG CGACCGCCAG CAAGACCGAC ACCTACATCA ACACCCTGAG CGGCAAGTGG
AACATCAGCG ACGCGCTGAA GCTGCGCTCC GCCCTGACCT ACCAGACGAG CGAGTTCGAC
ACCGAGTTCT TCGCCATGCG CGCCGATCGC GTGCACCGCG CCATTTCGGT GAACTTCAAC
AACGGCAGCG GCATCCCGGC CTTCCACTTC ATCGACGATC CCGCCACCAC GGTGAACGAG
AGCGACATGA CCCAGCCCAG CCTGTGGAAC GTCGCGCAGC TTTACGACAA CGGTGACCGC
GACGAAGGCA GTGCGGTCAC GTGGACCGCG GACGGCGAAT ACACGCCGAA GATCGAGTTC
CTCAGCTCGA TCAAGTTCGG CCTCCGTTAC GACGATCGCG AAGCCTCCGA GGCGGAACGC
CGTCAGGATT CGCCAGGCTT GGGCCGTCCG CTGACGGATT TCCCCGAGCT TTACCACGTG
AACAGCGGCT TCTTCGACGG CCGCGCCGGC GTGCCCAGCA GCTGGATCGT GCCGAACGGC
CTCGCGATCT TCAACGACGC CGACCACTAT CGCAGTCTCT ACAACCGGAC CAAGCTGCCG
CTTGTCGAGA ACTTCAACGT GACCGAGAAG AACATGTCCG GTTACGTCCG CGGAGACTTC
AAGACCTTCC TCTCTGGTCA CCGGCTCGAC GGCCAGGTCG GCGCACGCTA CGTGAACGTG
AAGACCGACA TGTCCTTTGG CGCCGGCTCG GCCTCGGAGA AGAAGTCCAA GCTCCTCCCG
AGTGGCTCGC TGCGCTTCCA GATCACGCCC GATCTGATCG CCCGCGCCAG CTACGCGGAA
ACACTCCGCC GGCCGAACTT CAACCAGCTG AATCCGAATA TCACGTACGT GCGCGACGTG
ACGAACATCG GTTACGGTAC CGCGTCCGGT GGCAATCCGA ACCTTCGTCC GACGCAGTCG
AAGAACTACG ACCTGGCGCT GGAATACTAC TTCGGTGGCA ACAAGACCCG CAGCAACGCG
ATCTACATCA GCTTGTTCAA GCGTGAGATC GACGGCTTCG TGGTCGACTT CCGCCGCCGC
GTGACCGCGA CCGCGCCCGG CGACACGGGC CCGTACGACT ACATCCTCAG CCAGCCGGAC
AATGCTTCCA ACGGCGAACT CGAAGGCTAC GAGGTCGGCT TGGTCTACTT CCCGGACCTT
CCCGGAATCT TCCAAGGCTT CGGCGTGCAG GCCAGCTACA CGTCACTGGA CTCGTCGCAG
GACATTCCGA TCACCGACAG CCAGGGCCGC GTCACCGGCA CGCTCAATCG TCCCATGTTC
GGCGTCTCCG ATTCGTCCTA CAACATCACG CTCGCTTACG AGCGCAGCAA GGTCGGCGCG
CGGCTCTCGT ATGTCTGGCG CGAGGCCTTC CTCTACGATT ACGAAGCGGC GCTGTTCGCG
AATCCGCTGG GCCGTTACCG TCGGCCGGAA GCGAGCCTGG ACTTCCAGCT CAGCTACCGC
GTCACGGATC GGCTGACGAT GACGGTGGAT GCGACCAATC TCACGGAGGA GCTCTATCAG
AGTTACTACG GCGAGAACGG TGCGACCGTG CACAACTTCG GCACGTCGCT GTTCAGCCGC
ACCATCGCCG TCGGCGCGCG CTACTCGTTC TAA
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| Protein sequence | MTPNSPRTSR SFPAQKRKTA GNALAVLLVL AAGVTLGQAQ PTAPAATPTD DNVVQLDTYV
VSGFRSSLTA ALDIKRESVQ IVDSIVSEDI GKFPDNNLVE SMQRMTGIQV TNRGAGEIGT
VSIRGLNDIN TTLNGQNMFI SSGQAMALQD IPTTLLARVD VYKTRSSDLI ENGIAGSVDV
RTHRPFDFEG RRVALAARGI YQEQRDKIGP NYSALFSNRW KTANGGEVGA LVNISYAETP
YRDQNVTAGA QVPFVTGAGA VTGGVTWVPW ERIFPTRGGV AENPIWQAGL DSGLPTAPNS
TLQINGVAVP YVLARDAVFQ NDFTGTRKRP AVNIALQWAP SKDAEYTFES FYFGYDNTSF
NNLFFSFVDW WGGPHGPVEL YPGTNIVQSR AWTPFVYGFT SGDATASKTD TYINTLSGKW
NISDALKLRS ALTYQTSEFD TEFFAMRADR VHRAISVNFN NGSGIPAFHF IDDPATTVNE
SDMTQPSLWN VAQLYDNGDR DEGSAVTWTA DGEYTPKIEF LSSIKFGLRY DDREASEAER
RQDSPGLGRP LTDFPELYHV NSGFFDGRAG VPSSWIVPNG LAIFNDADHY RSLYNRTKLP
LVENFNVTEK NMSGYVRGDF KTFLSGHRLD GQVGARYVNV KTDMSFGAGS ASEKKSKLLP
SGSLRFQITP DLIARASYAE TLRRPNFNQL NPNITYVRDV TNIGYGTASG GNPNLRPTQS
KNYDLALEYY FGGNKTRSNA IYISLFKREI DGFVVDFRRR VTATAPGDTG PYDYILSQPD
NASNGELEGY EVGLVYFPDL PGIFQGFGVQ ASYTSLDSSQ DIPITDSQGR VTGTLNRPMF
GVSDSSYNIT LAYERSKVGA RLSYVWREAF LYDYEAALFA NPLGRYRRPE ASLDFQLSYR
VTDRLTMTVD ATNLTEELYQ SYYGENGATV HNFGTSLFSR TIAVGARYSF
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