Gene Oter_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2239 
Symbol 
ID6206326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2882130 
End bp2882762 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID641691894 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001819122 
Protein GI182414056 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT TCATCCTCGA AGATCACGTG ATGTTTCGGG AGGTGATTCG AAAGGCGTGC 
TCCCGGCAGC TGCGTCACGA AGTGGTTGGC GAGTCGGGCT CGGGCCTCGA AGCGCTCCAG
CTGATTGTGA AGCTCCGGCC CGAGTTGCTG CTGCTCGATC TCTCGCTGCC GGATCTGTCC
GGGCTCGAGG TCGCTCGCGT GGTGCGCCCA GCGGTTCCGA CGATGAAGAC CGTCGTGCTT
TCCTGTCACG TGGACGCCCA CACCGTGCAC GAGGTCGAAC GCGTCGGCGT GGAGGGTTTC
GTTGATAAAA CCTCCAGCAC GGTGAGCATG TTGGGGGACG CTCTCGCCGA CATCGCCGGC
GGCCGCACCT ATTTCTCTCC CGCGTTCAAA GCGGCGCAGC GCGCACACCG GCGCGATCAA
CAGTCCGCCG ACAAACTTCT TTCGGACACC GAGCGACGCG TGCTGTCGTT CATCGGCCAT
GGCTTGAGTG ACGAGGAAAT CGGCCAGCGG CTCGGCATCA CGCGCAACAC CGCGCAAACG
CACCGCAGCC ACATCCTCCG CAAGCTCCGC GTCGGGAACA GCGCCCGGCT GGCCGCCTAC
GCCGTGCGGC ACGGCTTCAC GCTCTACTCC TGA
 
Protein sequence
MKIFILEDHV MFREVIRKAC SRQLRHEVVG ESGSGLEALQ LIVKLRPELL LLDLSLPDLS 
GLEVARVVRP AVPTMKTVVL SCHVDAHTVH EVERVGVEGF VDKTSSTVSM LGDALADIAG
GRTYFSPAFK AAQRAHRRDQ QSADKLLSDT ERRVLSFIGH GLSDEEIGQR LGITRNTAQT
HRSHILRKLR VGNSARLAAY AVRHGFTLYS