Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2239 |
Symbol | |
ID | 6206326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2882130 |
End bp | 2882762 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691894 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001819122 |
Protein GI | 182414056 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.119856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT TCATCCTCGA AGATCACGTG ATGTTTCGGG AGGTGATTCG AAAGGCGTGC TCCCGGCAGC TGCGTCACGA AGTGGTTGGC GAGTCGGGCT CGGGCCTCGA AGCGCTCCAG CTGATTGTGA AGCTCCGGCC CGAGTTGCTG CTGCTCGATC TCTCGCTGCC GGATCTGTCC GGGCTCGAGG TCGCTCGCGT GGTGCGCCCA GCGGTTCCGA CGATGAAGAC CGTCGTGCTT TCCTGTCACG TGGACGCCCA CACCGTGCAC GAGGTCGAAC GCGTCGGCGT GGAGGGTTTC GTTGATAAAA CCTCCAGCAC GGTGAGCATG TTGGGGGACG CTCTCGCCGA CATCGCCGGC GGCCGCACCT ATTTCTCTCC CGCGTTCAAA GCGGCGCAGC GCGCACACCG GCGCGATCAA CAGTCCGCCG ACAAACTTCT TTCGGACACC GAGCGACGCG TGCTGTCGTT CATCGGCCAT GGCTTGAGTG ACGAGGAAAT CGGCCAGCGG CTCGGCATCA CGCGCAACAC CGCGCAAACG CACCGCAGCC ACATCCTCCG CAAGCTCCGC GTCGGGAACA GCGCCCGGCT GGCCGCCTAC GCCGTGCGGC ACGGCTTCAC GCTCTACTCC TGA
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Protein sequence | MKIFILEDHV MFREVIRKAC SRQLRHEVVG ESGSGLEALQ LIVKLRPELL LLDLSLPDLS GLEVARVVRP AVPTMKTVVL SCHVDAHTVH EVERVGVEGF VDKTSSTVSM LGDALADIAG GRTYFSPAFK AAQRAHRRDQ QSADKLLSDT ERRVLSFIGH GLSDEEIGQR LGITRNTAQT HRSHILRKLR VGNSARLAAY AVRHGFTLYS
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