Gene Oter_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2235 
Symbol 
ID6205553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2876922 
End bp2878247 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content65% 
IMG OID641691890 
Producthomoserine dehydrogenase 
Protein accessionYP_001819118 
Protein GI182414052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.070475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGT TCAACCTCGG CATGATCGGC GGCGGCACGG TGGGCAGCGG CGTATTTCAC 
GCACTGCAGC AAAACTCCGC GCTGCTGACG GCGCGCATCG GTGTGGGCAT CGCGATCCGC
AAGGTGGCGG TGAAGGCGTT CGACGAGCCC CGCCCCTACC CGATCACCGA GAAGCTGATG
ACGCTGAATT GGCGCGACGT GGTCGAGGAT CCGGAGATTC ACATCGTCAC CGAGCTCGTC
GGTGGCACGG GGATCGCGAA GACCATGATC CTCGCCGCAC TCGAGCGCGG CAAAGCCGTC
GTCACGGCCA ACAAGGCGCT GATCTCCGCG CACGGCCCTG AGTTGTTCGC CGCCGCGCGC
AAGCACAACA CCAGCCTCTA CTTCGAGGCG AGCGTCGCCG GCGGGATTCC CATCATCAAG
GTCCTCCGCG AAAGCATGGT CGGCAATCGC ATCGACCGGA TCGACGGCAT CGTCAACGGC
ACCTGCAACT ACATTCTCAC CCGGATGAAG CGCGAAGGCG CGGCTTTCGC CGACGTGCTC
GCCGACGCCC AGCGGCTCGG CTACGCCGAG GCGGATCCGA CGCTCGACGT CGACGGCCAC
GACGCCGCGC ACAAAATCGG CATCCTCGCC TCGCTCGCGC ATGGCTTCTG GGTCGACCAT
CACGATATCC ACGTCGAGGG CATCCGTTCG CTCACCCCGC TCGACATCCG TTTCGCGGCT
CAACTTGGCT ACACCATCAA GCTCCTCGGG ATGGTCCGCA TGGCGCCGCC TGCATCCGGC
AAGAAAAATT CCGGCCCGCG GATCAGCGTC TCAGTCAGTC CCACGCTGGT GCCGGACGGA
CACGTGCTCG CCAGCGTCAA CGACGTGTTC AATGCGGTCT TCGTGTCCGG TTCGCCGATT
GGCGATACGC TCTATTACGG ACGCGGCGCC GGCAAGGACG CCACCGCAAG CGCCATCTTG
AGCGACATCG CCGACGCGGC GCTCGATCGC AAGCACGGCA CACCGCAGCG CGTACCGCCC
TTCGTCGCCC ACGCGCGCGA CGGCAAGGTG ATCCCCTACG CCGAAACCCG TTCGCGATTC
TACCTTCGGC TCAACGTGCT CGATCGCGCC GGCGTGATCG CCAAGATTTC CGCCATCATC
AGCAAGGCGG GGCTCAGCCT CTCCTCGATC GTTCAACCCG AAGGTCACGA AGGCGAAACG
GTGCCGCTGA TCCTCATGAC GCACATCGCG CAACGCGCCG CGATGGACAA AGCAGTCACT
GCGATCAGCA AGCTGCCCGC CGTCAAAGGC CCGTCGTTGC TGCTCCCGGT CGAGGACTTT
GGATAA
 
Protein sequence
MNQFNLGMIG GGTVGSGVFH ALQQNSALLT ARIGVGIAIR KVAVKAFDEP RPYPITEKLM 
TLNWRDVVED PEIHIVTELV GGTGIAKTMI LAALERGKAV VTANKALISA HGPELFAAAR
KHNTSLYFEA SVAGGIPIIK VLRESMVGNR IDRIDGIVNG TCNYILTRMK REGAAFADVL
ADAQRLGYAE ADPTLDVDGH DAAHKIGILA SLAHGFWVDH HDIHVEGIRS LTPLDIRFAA
QLGYTIKLLG MVRMAPPASG KKNSGPRISV SVSPTLVPDG HVLASVNDVF NAVFVSGSPI
GDTLYYGRGA GKDATASAIL SDIADAALDR KHGTPQRVPP FVAHARDGKV IPYAETRSRF
YLRLNVLDRA GVIAKISAII SKAGLSLSSI VQPEGHEGET VPLILMTHIA QRAAMDKAVT
AISKLPAVKG PSLLLPVEDF G