Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2235 |
Symbol | |
ID | 6205553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2876922 |
End bp | 2878247 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691890 |
Product | homoserine dehydrogenase |
Protein accession | YP_001819118 |
Protein GI | 182414052 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.070475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGT TCAACCTCGG CATGATCGGC GGCGGCACGG TGGGCAGCGG CGTATTTCAC GCACTGCAGC AAAACTCCGC GCTGCTGACG GCGCGCATCG GTGTGGGCAT CGCGATCCGC AAGGTGGCGG TGAAGGCGTT CGACGAGCCC CGCCCCTACC CGATCACCGA GAAGCTGATG ACGCTGAATT GGCGCGACGT GGTCGAGGAT CCGGAGATTC ACATCGTCAC CGAGCTCGTC GGTGGCACGG GGATCGCGAA GACCATGATC CTCGCCGCAC TCGAGCGCGG CAAAGCCGTC GTCACGGCCA ACAAGGCGCT GATCTCCGCG CACGGCCCTG AGTTGTTCGC CGCCGCGCGC AAGCACAACA CCAGCCTCTA CTTCGAGGCG AGCGTCGCCG GCGGGATTCC CATCATCAAG GTCCTCCGCG AAAGCATGGT CGGCAATCGC ATCGACCGGA TCGACGGCAT CGTCAACGGC ACCTGCAACT ACATTCTCAC CCGGATGAAG CGCGAAGGCG CGGCTTTCGC CGACGTGCTC GCCGACGCCC AGCGGCTCGG CTACGCCGAG GCGGATCCGA CGCTCGACGT CGACGGCCAC GACGCCGCGC ACAAAATCGG CATCCTCGCC TCGCTCGCGC ATGGCTTCTG GGTCGACCAT CACGATATCC ACGTCGAGGG CATCCGTTCG CTCACCCCGC TCGACATCCG TTTCGCGGCT CAACTTGGCT ACACCATCAA GCTCCTCGGG ATGGTCCGCA TGGCGCCGCC TGCATCCGGC AAGAAAAATT CCGGCCCGCG GATCAGCGTC TCAGTCAGTC CCACGCTGGT GCCGGACGGA CACGTGCTCG CCAGCGTCAA CGACGTGTTC AATGCGGTCT TCGTGTCCGG TTCGCCGATT GGCGATACGC TCTATTACGG ACGCGGCGCC GGCAAGGACG CCACCGCAAG CGCCATCTTG AGCGACATCG CCGACGCGGC GCTCGATCGC AAGCACGGCA CACCGCAGCG CGTACCGCCC TTCGTCGCCC ACGCGCGCGA CGGCAAGGTG ATCCCCTACG CCGAAACCCG TTCGCGATTC TACCTTCGGC TCAACGTGCT CGATCGCGCC GGCGTGATCG CCAAGATTTC CGCCATCATC AGCAAGGCGG GGCTCAGCCT CTCCTCGATC GTTCAACCCG AAGGTCACGA AGGCGAAACG GTGCCGCTGA TCCTCATGAC GCACATCGCG CAACGCGCCG CGATGGACAA AGCAGTCACT GCGATCAGCA AGCTGCCCGC CGTCAAAGGC CCGTCGTTGC TGCTCCCGGT CGAGGACTTT GGATAA
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Protein sequence | MNQFNLGMIG GGTVGSGVFH ALQQNSALLT ARIGVGIAIR KVAVKAFDEP RPYPITEKLM TLNWRDVVED PEIHIVTELV GGTGIAKTMI LAALERGKAV VTANKALISA HGPELFAAAR KHNTSLYFEA SVAGGIPIIK VLRESMVGNR IDRIDGIVNG TCNYILTRMK REGAAFADVL ADAQRLGYAE ADPTLDVDGH DAAHKIGILA SLAHGFWVDH HDIHVEGIRS LTPLDIRFAA QLGYTIKLLG MVRMAPPASG KKNSGPRISV SVSPTLVPDG HVLASVNDVF NAVFVSGSPI GDTLYYGRGA GKDATASAIL SDIADAALDR KHGTPQRVPP FVAHARDGKV IPYAETRSRF YLRLNVLDRA GVIAKISAII SKAGLSLSSI VQPEGHEGET VPLILMTHIA QRAAMDKAVT AISKLPAVKG PSLLLPVEDF G
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