| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2231 |
|---|
| Symbol | |
|---|
| ID | 6206705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2874121 |
|---|
| End bp | 2875017 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641691886 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001819114 |
|---|
| Protein GI | 182414048 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.392595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0608782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTCG ACCTCCTCCG CTCGTTCTTC GCCATCGTCG ATCAGGGCAG CCTCAACAAG
GCCGCGGAAC GGCTGCACGT GTCGCAATCC ACGCTCAGCC GCCAGATGCA CGCGCTCGAG
CACGAGATCG GCGGACGCAT TTTCGAACGC AGCGCGAGCG GGGTGGCGCT CACCGCGACG
GGCCACGCGC TGCACGACAG CATGCGGCCG CTGCTCGGCC GTTTCGAGAC CGCGTTGGGG
GAGGCCCGCC GGCTCGCGCG CGGTCAACGC TCCGATCTGC GGATCGGCTA TCTCATGTCC
GCGGCCGCGG AATATCTGCA TCCCGCGCTG GCTGCGCTTC GCCGCACGCA CCCCGAGGTG
AAGGTGAAGC TCCTCGACCT TTCGCCCGGC GAACAGATCG GCGCGCTGCG TCGCGGCGAG
ATCGATCTGG CATTGCTCGG CAACGCCGGC GCGTTCCTTT CGCGCGAGTT TTTCGTCCGC
CGGCTGGCGC TCCTGCCAGT GTTCGTGGCC GTGGCCGACA CACACCCGTT GGCCGGACGC
CGCACCCTCG CGCTGGCCGA TTTGCGCGGA GAACTCTTCG TCGGCGCCGA CGAACGGGAC
ATGCCCGGCC ATAATCAATG GATCGTCCAG CTCTGCCGCC GCGCGCGATT CCGGCCGCGG
TTCGTGCTCG ATGCCGAGAG TCTGACGCAC GCGCTCGCGA CGGTGGTCAC CGAGGGCGCC
GTCCTGCTGC AGCCCGACTA CGCGCGCAGC ATGAAAGTGC CCGGCATCGT CTTCCGCCCG
CTGCAGGATT CCGCCGTGAA ATGGGAACTT CTGCTCGCCT GGCAACGCGG CAAGGTGGCC
GATCCGGTCC GCGCCATCCT CGCCGCCCTC CCGACCCAGC GTGGCGCCGC CGGCTAG
|
|---|
| Protein sequence | MNLDLLRSFF AIVDQGSLNK AAERLHVSQS TLSRQMHALE HEIGGRIFER SASGVALTAT
GHALHDSMRP LLGRFETALG EARRLARGQR SDLRIGYLMS AAAEYLHPAL AALRRTHPEV
KVKLLDLSPG EQIGALRRGE IDLALLGNAG AFLSREFFVR RLALLPVFVA VADTHPLAGR
RTLALADLRG ELFVGADERD MPGHNQWIVQ LCRRARFRPR FVLDAESLTH ALATVVTEGA
VLLQPDYARS MKVPGIVFRP LQDSAVKWEL LLAWQRGKVA DPVRAILAAL PTQRGAAG
|
|---|
| |