Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2221 |
Symbol | |
ID | 6204745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2862227 |
End bp | 2863762 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691876 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001819104 |
Protein GI | 182414038 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0708866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCGTTCCCGC CCCCGCGGCC ACCCACCGCG GCGCCATCAC CGTCTGCGTG ATGCTCGCCA CGATCATGCA GGCGCTCGAC ACCACGATCG CCAATGTAGC GCTGCCCTAC ATGCAGAGCA GCCTCTCGGC CGCGCAGGAC CAGATCAATC TCGTGCTGAC GTCCTACATC GTCGCCGCGG CGATCATGAT GCCGGCGACC GGCTGGTTGT CCGCCCGGCT CGGTCGGAAA AACCTGTTCC TGCTCTCCGT CGCGGGCTTC ACGTTCGCCT CGGTCCTCTG CGGCCTGGCC GGATCGCTCG GCCAGATGGT GCTCTTTCGA CTGCTGCAAG GCGTCTTCGG CGCGACGCTC GTGCCGCTTT CCCAAGCGGT CCTGCTCGAC GAATACCCGC CGGCGCAGCA TGGCTCGGCG ATGGCGCTGT GGGGCGTCGG CGTGATGGTG GGCCCGATCC TGGGTCCGAC ACTCGGCGGC TGGCTGACGG AGACCTACGA CTGGCGTTGG GTCTTCTATA TCAACCTGCC AGTGGGCGTG CTGACGTTTC TCGGGCTCTC GCGCTACCTG CATCGAACCA CCCCGCAGCG CGGACTCTAT TTCGACGGCT TCGGCTTTCT CACGCTCGCG GTCGCGATCG GCGCGCTGCA GATGATGCTC GATCGCGGCG AACAACTGCA GTGGTTCGAC TCACCGGAAA TCATGGCCGA GGCGGCACTG TCCGGGCTCG GGCTTTACCT GTTCGTAGTG CACACGCTGA CCGCGCGCCG GCCGTTTCTC GACCTACGGC TGTTCCGCGA CCGCAATTTC GCCACGGGCA TGATTTTCAT CTTCGTCGTT GGCGTGATCT TGCTGGCGAC GCTGGCCCTG CTGACGCCGT TCCTGCAGAC GCTGTTGAAT TATCCGGTCA TGACCGCCGG CATGTTGCTG GCGCCGCGCG GCGTCGGCAC GATGCTCGCG ATGATCATCG TCGGCCGGCT GGTTTCGCGG GTGGATCCGC GCTGGCTCGT CGCGCTGGGG CTGTTGCTGA CGGCCGCGGC GCTGTGGCAG ATGAGCCGGT TCTCGCTCGA TGTCACGGCC ACGATGCTCG TGTGGTCCGG CGTGGTGCAG GGGCTTGGGC TCGGCTTCCT CTTCGTGCCG CTTAGCACGA TGACCTTCGC CACCCTACCT GCCGATCTGC GGACTTCGGG CACCGCGCTC TACAGCCTGT CGCGGAATCT CGGCTCGAGC ATCGGCATCT CGGTTGTCAT TTACCTGCTG GGGCAGTTTC ACAGCCGCGC ACACGCCAAC CTCGCCGAAT TCGTGCAGCC GTTTCGGGAT CCGATGCAGC ATCTGCCGGC GCTCCTGGAC CCGTCGACGG CCGCCGGCCA GTCGCTGCTG GAACGGTTGG TTTCGCAGCA GGCCGCGCTG CTCGCGTATT TGAGCGATTT CCGGTTCATG CTCTACGTCG CGCTCGCTGC GCTCCCCCTG GTGTTGCTCA TGCGGCGACC GAATCACCGC GCCAGTGACG AGGAACTCGC CGCGGCGATG GAGTAG
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Protein sequence | MTAAVPAPAA THRGAITVCV MLATIMQALD TTIANVALPY MQSSLSAAQD QINLVLTSYI VAAAIMMPAT GWLSARLGRK NLFLLSVAGF TFASVLCGLA GSLGQMVLFR LLQGVFGATL VPLSQAVLLD EYPPAQHGSA MALWGVGVMV GPILGPTLGG WLTETYDWRW VFYINLPVGV LTFLGLSRYL HRTTPQRGLY FDGFGFLTLA VAIGALQMML DRGEQLQWFD SPEIMAEAAL SGLGLYLFVV HTLTARRPFL DLRLFRDRNF ATGMIFIFVV GVILLATLAL LTPFLQTLLN YPVMTAGMLL APRGVGTMLA MIIVGRLVSR VDPRWLVALG LLLTAAALWQ MSRFSLDVTA TMLVWSGVVQ GLGLGFLFVP LSTMTFATLP ADLRTSGTAL YSLSRNLGSS IGISVVIYLL GQFHSRAHAN LAEFVQPFRD PMQHLPALLD PSTAAGQSLL ERLVSQQAAL LAYLSDFRFM LYVALAALPL VLLMRRPNHR ASDEELAAAM E
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