| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2217 |
|---|
| Symbol | |
|---|
| ID | 6204760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2856036 |
|---|
| End bp | 2857226 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691872 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001819100 |
|---|
| Protein GI | 182414034 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0256212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC GCACCGATGA CGACGCGAGC GTTCCGATCG CGTCATTTTC CACGCCAACC
GACCTGCGGC CGTTTGTGCA GCTCACCGCC GGGTTGGCGC CCCCGCTCAA CACGCTGCTG
ACGACGATCA CCGGCCGCAC AATGATGCTG TTGGGTGATC CCGCGCTCGA TGAGCAAACG
CGCGAACGGC TGAATGAAAT CTATATGGCC GGAGAACGCG CCGTCAGTCT GACCCGGCAG
TTGCTGTTTC TTAGCGGTCG TTCGCCGCCG CAGCTGCGGA CGCTCGATCT CAATGCGCTG
GCCACCCAGT TGACCACCGT GCTGCAACGG TCGCTGCACC GCGGCCTCAC GCTGGAACTA
GGACTCGCGC CCGGGCTGCG CCTCGTCCGC GCGGACGCCG ACATGCTCGA ACAGATACTC
GTCGCCCTGA CGCGCAACGC CAGCGACGCG ATGCCGCACG GGGGCGAGTG TCGCGTGAGC
ACCGCCAATG TTGTCCTCAC CGCCGCCGAG GCGGCCCGGC ACGCGGGCCC ACGGGCCGGT
GAATTCGTCA CAGTGGTCGT CGCTGACACC GGCACCGGCA TCGCGCCCGA AGTGCTGCCG
CGGCTGTTCG AGCCGTTTGT CACGACCAAG CCGCCAGGGC ACGGCGCCGG CCTTGGCCTG
GCCGCCGCGT ACAGCATCCT GCAGCAGCAC CAAGGCTGGC TGGCGGTCAA ATCCACTCCC
GGCGCCGGCA CGGAGTTCAC GGTGTTCCTC CCCGCCGCCC CCAGCGACGC CGTGCCCGAC
GAGCCGGCGA TACGGGACGA TCGTTCTAGC CTTGGTCATC CGACCATCCT CTTTGTGGAG
GACGACCCAC TGACGCGTGA ATTCACGACC GCCGTCCTGC AGGATCTCGG TTACCGTGTG
TTACAGGCCG GCACCGCCGC CGACGCGCGG GAGACGTGGA AATGGCACCG CTCGCGGATC
CGGCTGCTCC TCACGGACGT GGTGTTGGAC GGTCGCCAAA GCGGCCTGGA CCTCGCTGCC
CAGCTCCGGG CCGCTGCTCC CGGACTCGGC GTGATCTTCA CGAGCGGCCA CGGCCGCGCG
ATCCTCGATC GCGCTCCTGC ACTCCCGGGC GGCATCTTCC TGCAGAAACC CTTCCGTACG
CAGGCGCTGG CCTGCGCGCT TCGGACCGTG CTCGACACTC CTGTATCATG A
|
|---|
| Protein sequence | MTSRTDDDAS VPIASFSTPT DLRPFVQLTA GLAPPLNTLL TTITGRTMML LGDPALDEQT
RERLNEIYMA GERAVSLTRQ LLFLSGRSPP QLRTLDLNAL ATQLTTVLQR SLHRGLTLEL
GLAPGLRLVR ADADMLEQIL VALTRNASDA MPHGGECRVS TANVVLTAAE AARHAGPRAG
EFVTVVVADT GTGIAPEVLP RLFEPFVTTK PPGHGAGLGL AAAYSILQQH QGWLAVKSTP
GAGTEFTVFL PAAPSDAVPD EPAIRDDRSS LGHPTILFVE DDPLTREFTT AVLQDLGYRV
LQAGTAADAR ETWKWHRSRI RLLLTDVVLD GRQSGLDLAA QLRAAAPGLG VIFTSGHGRA
ILDRAPALPG GIFLQKPFRT QALACALRTV LDTPVS
|
|---|
| |