Gene Oter_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2206 
Symbol 
ID6206720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2837209 
End bp2837964 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID641691861 
ProductABC transporter related 
Protein accessionYP_001819089 
Protein GI182414023 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.661126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCCG TCACTCCCCC CTCCCCCGTC TCACCGGTCC CGGCGACCGA GCGCGATCCG 
CTGTTTCGCG CGCGCGGGCT CACCAAGGTC TACGCCACCG GCGACGTGGA GGTGCGCGCC
CTCAACGGCG TGGATCTCGA CCTGTTTGCC AGTGAACTGG TCGTGCTGCT CGGCGCCTCC
GGCAGCGGCA AGTCGACGTT GCTGAACATT CTCGGCGGAC TCGATGTGCC GACCGACGGC
AGCCTGACCT TTCGCGACGC AGACCTGACG CATGCCGATG AAAACGATCT CACGCGCTAT
CGCCGCGAAA CGGTCGGGTT CGTGTTTCAG TTCTACAACC TCATCCCGAG CCTGACCGCG
CGGGAGAATG TCGCGCTCAT CACCGAGATC GCGCGCGATC CGATGTCGCC CGAAGAAGCG
CTGCAGCTGG TCGGGCTCGG CCCGCGCATG GATCACTTTC CTTCGCAGCT CTCCGGCGGC
GAACAGCAGC GCGTCGCCAT CGCGCGCGCC ATTGCCAAGC GGCCCGAGGT GCTGCTCTGC
GACGAACCCA CCGGCGCGCT CGACGTGAAG ACCGGCGTGT CCGTGCTGGA CGCGATCGAT
CGCGTGAACC GCGATCTCGG CACGCTCGCA GTCGTCATCA CGCACAACGC CGTCATCGCC
GACATGGCCG ATCGCGTGAT TCATCTCTCC GACGGTGCCA TCACGCAGAT CCACCGCAAC
GCCCAGCGCC AGTCGGTGCA GTCGCTGAAA TGGTAG
 
Protein sequence
MGSVTPPSPV SPVPATERDP LFRARGLTKV YATGDVEVRA LNGVDLDLFA SELVVLLGAS 
GSGKSTLLNI LGGLDVPTDG SLTFRDADLT HADENDLTRY RRETVGFVFQ FYNLIPSLTA
RENVALITEI ARDPMSPEEA LQLVGLGPRM DHFPSQLSGG EQQRVAIARA IAKRPEVLLC
DEPTGALDVK TGVSVLDAID RVNRDLGTLA VVITHNAVIA DMADRVIHLS DGAITQIHRN
AQRQSVQSLK W