Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2206 |
Symbol | |
ID | 6206720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2837209 |
End bp | 2837964 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691861 |
Product | ABC transporter related |
Protein accession | YP_001819089 |
Protein GI | 182414023 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.661126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0101904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCTCCG TCACTCCCCC CTCCCCCGTC TCACCGGTCC CGGCGACCGA GCGCGATCCG CTGTTTCGCG CGCGCGGGCT CACCAAGGTC TACGCCACCG GCGACGTGGA GGTGCGCGCC CTCAACGGCG TGGATCTCGA CCTGTTTGCC AGTGAACTGG TCGTGCTGCT CGGCGCCTCC GGCAGCGGCA AGTCGACGTT GCTGAACATT CTCGGCGGAC TCGATGTGCC GACCGACGGC AGCCTGACCT TTCGCGACGC AGACCTGACG CATGCCGATG AAAACGATCT CACGCGCTAT CGCCGCGAAA CGGTCGGGTT CGTGTTTCAG TTCTACAACC TCATCCCGAG CCTGACCGCG CGGGAGAATG TCGCGCTCAT CACCGAGATC GCGCGCGATC CGATGTCGCC CGAAGAAGCG CTGCAGCTGG TCGGGCTCGG CCCGCGCATG GATCACTTTC CTTCGCAGCT CTCCGGCGGC GAACAGCAGC GCGTCGCCAT CGCGCGCGCC ATTGCCAAGC GGCCCGAGGT GCTGCTCTGC GACGAACCCA CCGGCGCGCT CGACGTGAAG ACCGGCGTGT CCGTGCTGGA CGCGATCGAT CGCGTGAACC GCGATCTCGG CACGCTCGCA GTCGTCATCA CGCACAACGC CGTCATCGCC GACATGGCCG ATCGCGTGAT TCATCTCTCC GACGGTGCCA TCACGCAGAT CCACCGCAAC GCCCAGCGCC AGTCGGTGCA GTCGCTGAAA TGGTAG
|
Protein sequence | MGSVTPPSPV SPVPATERDP LFRARGLTKV YATGDVEVRA LNGVDLDLFA SELVVLLGAS GSGKSTLLNI LGGLDVPTDG SLTFRDADLT HADENDLTRY RRETVGFVFQ FYNLIPSLTA RENVALITEI ARDPMSPEEA LQLVGLGPRM DHFPSQLSGG EQQRVAIARA IAKRPEVLLC DEPTGALDVK TGVSVLDAID RVNRDLGTLA VVITHNAVIA DMADRVIHLS DGAITQIHRN AQRQSVQSLK W
|
| |